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S1-18-all-fractions_k255_7457965_1

Organism: S1-18-all-fractions_metab_101

near complete RP 47 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 7
Location: comp(1..1206)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit (EC:4.2.2.2) similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 427.0
  • Bit_score: 352
  • Evalue 1.50e-94
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV83899.1}; EC=4.2.2.2 {ECO:0000313|EMBL:AEV83899.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 427.0
  • Bit_score: 352
  • Evalue 7.40e-94
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000364A38A similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 411.0
  • Bit_score: 357
  • Evalue 9.60e-96

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Taxonomy

Actinoplanes sp. SE50/110 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGAGCCTCGATCACCTCGTCGTCCGTGCCCGGTCGGGGGACCGCGCCGCGCTGGAGGAGCTGGTCCGGCTGTCCCTGCCGCTGGTCTACACGGTGGTGCGCCGCGCACTGGGTACGGATCCGGCGGTCGACGACGTCGTGCAGGAGGTCATGGTCCGGATGCTGCGGAGGCTGCCGGACCTCCGGGCGGCTGATCGGTTCCGGGCCTGGCTGATGGCCATCACGCTGCGCCGGATCGGCACCCACCTCCAACACGAGCACGCGAGGTCCGGCCGCCATGTGACCCTCGAGGAGGCGGCCGATGTGTCCGGCGGCGCGGAGTTCGAGGAGGTCACGCTGCTGCGGGTGGAACTGTCCCGGCAGCGGCGCCAGATGATGCAGGCCACGCGGTGGCTCGACGCCGACCACCGGGCGCTGCTGCCGCTGTGGGGATTGCTGGTCTCGGGCGAGCTGACCCGCGCCGAGGTGGCGGAGGCCATGGGCATCGGTGCCGGCCATGCCGGAGTACGGCTGCAGCGCATGCGGGCACAGCTCCAGCAATGCCGGGGCATCGTCGTCGCGCTCGACGCCACGCCCGGCTGCGAGCGGTTGAACACCGTCGTGGCCGACTGGGACGGCGTGCCGGGTGTCCTGTGGCGCAAGCGGATCGGACGGCACATCGAGGTCTGCGATGTCTGCCGGCCCATCCTGCCGAGCCTCATCGCGCCCGAGCGACTCCTCGCCGGCCTCGCTCTGCTGCCGGTTCCGGTCGCGCTCGCCACCACGATCGCTGCCTTGAAGCCGCCCGCCGCGGCACCGATGGTGATCGCGCAGGCGTCCGGGTCGCCGACCGCGGCCGGAGTCGTCGAGCGGTTCGTCCGGGCGGTCGGCTCGCACCCCGTTGCCGCGGCGGTATCCGCAGGGACACTGGCCGCGGTGGTCGCAGTCACCACCACCGGCTTCGCCAAACCGGAGACCCCGGTCGCCGGTCCGGCAACCACGGCGCCGGTGTCAGCTCTGCCCGTGACGCCCACCGCACCGGCGCTCGAGGCGGGGCGCATATCGCTCCAGCCGGTCGACGCTCCGGGGCGCTTCCTGACCGTGGCCGGTGATCGCGCAGTGCTCGGTTCGAACCGCCGGGCTTCGACCTTCGAGGTGGTGCCCGGCCTGTCCGACGCTGCGTGCTACTCGTTCCGCACCGGTGACGGCCGTTTCCTCCGGCACGCT
PROTEIN sequence
Length: 402
MSLDHLVVRARSGDRAALEELVRLSLPLVYTVVRRALGTDPAVDDVVQEVMVRMLRRLPDLRAADRFRAWLMAITLRRIGTHLQHEHARSGRHVTLEEAADVSGGAEFEEVTLLRVELSRQRRQMMQATRWLDADHRALLPLWGLLVSGELTRAEVAEAMGIGAGHAGVRLQRMRAQLQQCRGIVVALDATPGCERLNTVVADWDGVPGVLWRKRIGRHIEVCDVCRPILPSLIAPERLLAGLALLPVPVALATTIAALKPPAAAPMVIAQASGSPTAAGVVERFVRAVGSHPVAAAVSAGTLAAVVAVTTTGFAKPETPVAGPATTAPVSALPVTPTAPALEAGRISLQPVDAPGRFLTVAGDRAVLGSNRRASTFEVVPGLSDAACYSFRTGDGRFLRHA