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S1-18-all-fractions_k255_5153774_4

Organism: S1-18-all-fractions_metab_101

near complete RP 47 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 7
Location: 3014..3535

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GXZ4_ACTM4 similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 173.0
  • Bit_score: 314
  • Evalue 5.30e-83
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 173.0
  • Bit_score: 316
  • Evalue 1.90e-83
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 173.0
  • Bit_score: 314
  • Evalue 1.50e-83

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Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGAAGAGACGGGTGAGTCCCGACGAGGAGCTGATGACCGCGCTCTACACGGAGCACTACGCGGTCCTGCTCAGCTTCATCTCGCGCTATGTCCGGGACCGGCACAAGGCCGAGGACCTGGTGCAGGAGACATTGCTGCGGGCCTGGAAGCACATCGACCACCTGGACACCGAACCCGGTCGTACCCGGTCGTACCTGCTGACCATCGCCCGCAACGTGGTGACCAACGCCTGGCGGGCCGAGCAGCGCCGGCCGCATCTGGTCGCCGACGAGGCCGCGGTGAACGCGGTGCCGGCCGCCGACAACGTCGACCAGATGGTGGAGGGCTGGCTGGTCGCCGAGGCGCTGGAGCGGCTGTCCGCCGAGCACCAGGCGGTGGTCCGGGCGATGTACTACGAGGGCCAGAGCGTGGCCGACGCGGCGCGCAAACTCGCCGTACCGGAGGGAACGGTCAAGTCCCGTGCCTACTACGCGGTTCGTGCCTTGCGGACGGCGTTCGAGGAGATGGGGGTGCTGCGATGA
PROTEIN sequence
Length: 174
MKRRVSPDEELMTALYTEHYAVLLSFISRYVRDRHKAEDLVQETLLRAWKHIDHLDTEPGRTRSYLLTIARNVVTNAWRAEQRRPHLVADEAAVNAVPAADNVDQMVEGWLVAEALERLSAEHQAVVRAMYYEGQSVADAARKLAVPEGTVKSRAYYAVRALRTAFEEMGVLR*