ggKbase home page

S1-18-all-fractions_k255_4783235_3

Organism: S1-18-all-fractions_metab_101

near complete RP 47 / 55 MC: 3 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 7
Location: comp(1437..1967)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 196.0
  • Bit_score: 144
  • Evalue 1.00e-31
2'-5' RNA ligase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VPI2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 196.0
  • Bit_score: 144
  • Evalue 7.30e-32
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 196.0
  • Bit_score: 144
  • Evalue 2.10e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGCGGCTGTTCGTGGCGATCTTCCCGTCCGAGGACGCCCGTGTTCACCTGCACGGCCGGATCACCGACGCGCTCGCCGGGCGCCGGGTCCGGCTCACGCCGGTCGAACGCTGGCACCTGACCCTCAGCTTTCTCGGTGAGATCGAGCCGGAGCGCCTGCCGGAGGTGCACCGTGCCTTGGACGGCGTGCCCACCACCGGGCCGATCACCCTGCGGATCTCCGGCGGTGGCTCGTTCGGGCGCGGGCGCGCGGCCCCGCTGTGGGCCGGAATCGACGGTGACCTGGCGGCACTGACTCGCCTGCACGGGGCCATCCGGGACCGGCTGGCCGGCTCCGGGCTGCCGTCCGAGACGCGGCCGCTCACCCCGCATCTGACCGTCGCCTACGCGCACAGCCCGGAGCTGCGCCAGGCGCTCAGCGGATACGCCGGGCCGACCTGGACCGCGGCGGAGTACGTGCTGGTGCGCAGCCGGCACGCCGAACGACGCGGATACGAGACGCTGCGGGCGTGGCCGCTGACCGGAGCCTAG
PROTEIN sequence
Length: 177
VRLFVAIFPSEDARVHLHGRITDALAGRRVRLTPVERWHLTLSFLGEIEPERLPEVHRALDGVPTTGPITLRISGGGSFGRGRAAPLWAGIDGDLAALTRLHGAIRDRLAGSGLPSETRPLTPHLTVAYAHSPELRQALSGYAGPTWTAAEYVLVRSRHAERRGYETLRAWPLTGA*