ggKbase home page

S1-18-all-fractions_k255_4057781_6

Organism: S1-18-all-fractions_metab_conc_39

partial RP 39 / 55 MC: 4 BSCG 38 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(4120..5355)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036C951D similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 410.0
  • Bit_score: 595
  • Evalue 3.70e-167
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH18476.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 413.0
  • Bit_score: 551
  • Evalue 8.50e-154
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 410.0
  • Bit_score: 545
  • Evalue 1.20e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGTCCGAGCCCGACGTCGAGAACCTGCTGCGCCAGCTGGCGCCGCAGGTTCTCGGCGCAGTGGTACGCCGCTACGGCCACTTCGACATTGCCGAAGATGCCGTGCAGGAGGCCATGCTCGCGGCGGCGACGCAATGGCCGAATGAAGGTCTGCCGGACAACCCGAAGGGCTGGTTGATCACGGTCGCCGCCCGCCGGCTCACCGATCTGCTGCGCAGCGAGCAGGCTCGCCGACGCCGCGAGGACACCGTTGCGCGGTGGCAGCTGCCTGAGCAGCAGATTGATGCCGAGGAAAGCCCAGATGACTCCGACGACACACTGATCTTGCTGTTCATGTGCTGCCACTCCGCCCTGTCGCCGTCGTCGCAGATCGCGCTCACCCTGCGGGCGGTCGGCGGCCTCACCACTGCCGAGGTCGGCCGCGCATTCCTGGTGTCCGAGGCCACCATGACCCGGCGGATTTCACGCGCGAAGCAGCAGATCAAAGACAGTGGGGTGCCGTTTCGGCTGCCGGGTCGACCGCAGCGCGCCGAGCGTCTCGCGGTGGTGCTCCACGTTCTCTACTTGATCTTCACCGAGGGCTACGCAGCGACCAGCGGCCACAACCTGTATCGCGTCGAGCTCTCCACAGAAGCCATCCGGCTGACCCGGATTGTCCATCAACTGCTCCCCAATGAGGGCGAAGTTGCCGGACTGCTGGCGCTGATGCTGCTCACCGACGCCCGCCGTCACGCCCGGACCACCCCGAACGGTGAGCTGGTGCCGCTCGCCGATCAGGACCGTACGCTCTGGGATGCCGACAAGATCGCTGAGGGCGTCGCCTTGATCACCGAAGCGTTGCCGCGCGGGACAGCCGGCCCGTACCAGCTCCAGGCCGCGATCGCGGCGATTCACGATGAGGCCCCGACCGCTGAGGAGACCGACTGGCCGCAGATCAAGGCGCTTTATGAGTTGCTGTTGCAGATCTCCGACAACCCGGTCATTGCGCTGAATCATGCCGTCGCTGTCGCGATGGCCGATGGCCCAACCAGCGGACTGGAGCGACTCGAAACACTGGCAACCGACAAGCAACTGGCTGAAGATCACCGGCTGTACGCGGTGCGCGCCCACCTGCTGGAGATGAGTGGCGAGAGGGAAGCCGCCTGCGAGGCGTATCGGGCAGCTGCCCGCAGGGCGAGGAACCTGCCACAACAGCGCTACCTGATCGGCCGGGCGACACGCCTACTTGATCACTGA
PROTEIN sequence
Length: 412
MSEPDVENLLRQLAPQVLGAVVRRYGHFDIAEDAVQEAMLAAATQWPNEGLPDNPKGWLITVAARRLTDLLRSEQARRRREDTVARWQLPEQQIDAEESPDDSDDTLILLFMCCHSALSPSSQIALTLRAVGGLTTAEVGRAFLVSEATMTRRISRAKQQIKDSGVPFRLPGRPQRAERLAVVLHVLYLIFTEGYAATSGHNLYRVELSTEAIRLTRIVHQLLPNEGEVAGLLALMLLTDARRHARTTPNGELVPLADQDRTLWDADKIAEGVALITEALPRGTAGPYQLQAAIAAIHDEAPTAEETDWPQIKALYELLLQISDNPVIALNHAVAVAMADGPTSGLERLETLATDKQLAEDHRLYAVRAHLLEMSGEREAACEAYRAAARRARNLPQQRYLIGRATRLLDH*