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S1-18-all-fractions_k255_4396053

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_4396053_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..728)
DNA (726bp) protein (242aa)
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S0_SOLUE
selenocysteine-specific translation elongation factor SelB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_4396053_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(738..3008)
DNA (2271bp) protein (757aa)
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] id=12554192 bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease R
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_4396053_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3016..3438)
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_4396053_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3490..4824)
DNA (1335bp) protein (445aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] id=12554194 bin=CNBR_ACIDO species=Halopiger xanaduensis genus=Halopiger taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative glycerate kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_4396053_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4797..5090)
DNA (294bp) protein (98aa)
id=12554195 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_4396053_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5159..6598)
DNA (1440bp) protein (480aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=12554196 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glutamyl-tRNA(Gln) amidotransferase subunit B
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_4396053_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6883..8085
DNA (1203bp) protein (401aa)
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=12554200 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hydroxymethylbutenyl pyrophosphate reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_4396053_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8075..8320)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_4396053_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8468..8923)
DNA (456bp) protein (152aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] id=12554208 bin=CNBR_ACIDO species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_4396053_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8928..9419)
DNA (492bp) protein (164aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_4396053_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9416..9751)
DNA (336bp) protein (112aa)
DnaK suppressor protein; K06204 DnaK suppressor protein id=12554209 bin=CNBR_ACIDO species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dksA; putative DnaK suppressor protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_4396053_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9841..12372)
DNA (2532bp) protein (844aa)
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis; K02004 putative ABC transport system permease protein id=12554210 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_4396053_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12369..13070)
DNA (702bp) protein (234aa)
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein id=12554211 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
antimicrobial peptide ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_4396053_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13067..13615)
DNA (549bp) protein (183aa)
lysophospholipase L1-like esterase (EC:3.1.1.2)
Lipolytic enzyme, GDSL family id=2960765 bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_4396053_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14235..15020)
DNA (786bp) protein (262aa)
protein phosphatase 2C-like protein; K01090 protein phosphatase [EC:3.1.3.16] id=12557201 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein serine/threonine phosphatase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_4396053_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15143..15352
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 16 items

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