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S1-18-all-fractions_k255_6953359_3

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(775..1338)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Patulibacter americanus RepID=UPI0003B39E40 similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 184.0
  • Bit_score: 192
  • Evalue 3.30e-46
RNA polymerase subunit sigma24 {ECO:0000313|EMBL:EWT01489.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 159
  • Evalue 2.50e-36
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 180.0
  • Bit_score: 151
  • Evalue 1.40e-34

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GTGCGCGAACAGGCAGTCGCGCGGCTGCATGCGCTGCTCGTTCGCGTCGCGCGTGGCGTCGCGGCGCGCCGGCGTGCGAACCTCCCGGCTCGCGCGCTGGAGGATGCTGATGACGTATGCGTTCATGCCGCGAACGACGCGCTCATGGCGGTGCTCGCCAAGCTGGACACCTACCGTGGCTCCGCGCGCTTCACCACCTGGGCGTGCAAGTTCGTCATCTTCGAGGCATCCACTCGGCTCCGTCGCCATGCGTGGCGTGAGCGAAGGGTCGAGCCCGACGAGACCATATGGGATCGCCTCCCCGATGCAGCCCCACCGGCGCTGCAGCGCCTGGAGAACGATCAGTTCATCGCGGCACTTCACCACGCCGTGAACGAGCAGCTCACGGAGCGTCAGCGGCTGGTCTTCCAGAGCGCCGTGTTGGAGGATGTGCCGATCGACGTGCTCGCGGAGCGACTCGGTACATCACGGGGCGCGATCTATAAAACCCTGCACGATGCGCGCGGAAAGCTTCGGCGTGCGCTGACCGAGGCAGGCCACGGGGAATCGGAGCCTGTGTCATGA
PROTEIN sequence
Length: 188
VREQAVARLHALLVRVARGVAARRRANLPARALEDADDVCVHAANDALMAVLAKLDTYRGSARFTTWACKFVIFEASTRLRRHAWRERRVEPDETIWDRLPDAAPPALQRLENDQFIAALHHAVNEQLTERQRLVFQSAVLEDVPIDVLAERLGTSRGAIYKTLHDARGKLRRALTEAGHGESEPVS*