ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

S1-18-all-fractions_k255_3774373_5

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 2847..4064

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter id=12554700 bin=CNBR_ACIDO species=Paenibacillus vortex genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 395.0
  • Bit_score: 381
  • Evalue 6.30e-103
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 393.0
  • Bit_score: 215
  • Evalue 1.70e-53
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 385.0
  • Bit_score: 483
  • Evalue 2.80e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
GTGAGCGGCGCATCGGACGATCGCCTGTTCACGCCGCGCTTCTTCGTGATGTGCGGGTTCACCTTCACGGTGTTCCTGTCGGCGCTGCAGCTGCTGCCCACGGCGCCCTTTCACATCCACGATCTCGGCGGGAGCACCGCCGCGTCGGGGTTGTTCCTCGGGCTGCTGACATTCTCGTCCGCGTTTTCCGCTCCCATCACGGGAGCATTGGCCGACAGGTTCGGACGTACGCGTCAGCTGCTCGTGTGCAGCATCGCCATCGCCGGCTTCTCTGTCCTGTACGCCATTGCACCTACGGTGCCGCTGCTGCTTCTGCTCGTCCCGTTACACGGCATCGTCTGGTCGGGCCTTCTGTCGGCGTCGGCGGCCTACATGACGAGCATTCTGCCGCCGTCGCGGCGCGCCGAGGGCATCGGATACTGGGGGTTCGCGTCCGTCATCGCCCTCGCTGTCGCGCCGCCCATCGGATTCTGGATATACCAATTCGGCTGGTTCTGGCTCTGCATGTTCGCGGCGCTGTTGAATGTGATCATGGCGGCTTTCGCATGGCAATTGCAGGAGGCGCCTCCTCCAGCCGTGCGTGCCACCTACGAGCACGATCCGCGAGGCTGGATTGAGTGGCGCGTGCTCCTGCTGTCCCTGCCGCTATTCCTCTACAGCTATGCCTACGGGGGAATCACGAGCTTCAGCGCGATGTACGCCGACTCACTCGGCATCACGCCCAAGAGCGTGTATCTCACCGCCTTGGCCGCGGTCATCCTGGTGACCCGGCCGATGTTCGGGCCGCTGGGAGATCGCTTCGGGTACCGCCGGGTCTTCGCGCCCTGCCTCGTGCTGATCACGGCTGGCCTCGTTCTGCTCGCGGTGGCGACCACACGCTCTGGGCTGATCCTCTCGGCCATCGTGTTCGGTACCGGGTTCGGCACCGCCTACCCGGTATTTGCCGCGTACGTCACCCATGGCGTGCGGGAAGACCGTCGCGGTGCGGCATTCGGCGCGATTCTCGCCGCGTTCGACACGGGCATCGGCACGGGCTCCTCATCGCTCGGGTGGCTGGTTGCGAACTTCGGATACGGCACGGCATTCGGGATCGCCGCAGCGCTGTCCGCGCTCGCGTTGCCGGCGTTCTTCTTCGCTGACCGGCAAGTGGGCCTGCAGCCGGCATCAACAGCGCCGCCTACGGGCGTGACCGCGGAGCGACCGGCGCCGACCACGTGA
PROTEIN sequence
Length: 406
VSGASDDRLFTPRFFVMCGFTFTVFLSALQLLPTAPFHIHDLGGSTAASGLFLGLLTFSSAFSAPITGALADRFGRTRQLLVCSIAIAGFSVLYAIAPTVPLLLLLVPLHGIVWSGLLSASAAYMTSILPPSRRAEGIGYWGFASVIALAVAPPIGFWIYQFGWFWLCMFAALLNVIMAAFAWQLQEAPPPAVRATYEHDPRGWIEWRVLLLSLPLFLYSYAYGGITSFSAMYADSLGITPKSVYLTALAAVILVTRPMFGPLGDRFGYRRVFAPCLVLITAGLVLLAVATTRSGLILSAIVFGTGFGTAYPVFAAYVTHGVREDRRGAAFGAILAAFDTGIGTGSSSLGWLVANFGYGTAFGIAAALSALALPAFFFADRQVGLQPASTAPPTGVTAERPAPTT*