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S1-18-all-fractions_k255_2622805_19

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(24573..25139)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NR08_GRAMM similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 193.0
  • Bit_score: 170
  • Evalue 1.00e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 193.0
  • Bit_score: 170
  • Evalue 2.90e-40
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 173.0
  • Bit_score: 209
  • Evalue 3.60e-51

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGAAGCCCGAAGAAGCCGACCTGATTGACCGATGCAAACGGCAGGAGCCCGGGGCCTTCGAGGAGCTCTACCGATTGCACTCGGGCAGGGTTTACAACCTGGCGTGCCGGATGACGGGCAGCCTCTCGGACGGTGAAGACCTGATGCAGGACATCTTCGTGCAGGTCTTCCGCAAGCTGGACGGCTTCAAGGGAGAGTCCGCGGTGGGCACCTGGATCTACAGGCTCGCGATGAACCAATGCCTCGACTATCTCCGCGGTCGCGACGCAAAGGCACGCAAGCTGACCGACACCATCGAGCACGAGGGAGCGCTCCCGGTACACGCCGTGCGCCCGATGCGGGCAGACCGTGTGGATCTGGAACGGGCGATCGCGCGGCTGCCGCCAGGGTATCGGGCGGCGTTCGTGCTGCACGACGTGGAGGGGTTCGAGCACCAGGAGGTGGCGAACATCCTCGGCATCGCGGAAGGCACCTCGAAGTCACAGGTGCACAAGGCTCGCATGAAGATTCGCGAGTATCTCGTGGCTGCGCCGCCACTCGAGGCGGCCGGCCGCTCCCGTGCGTAA
PROTEIN sequence
Length: 189
VKPEEADLIDRCKRQEPGAFEELYRLHSGRVYNLACRMTGSLSDGEDLMQDIFVQVFRKLDGFKGESAVGTWIYRLAMNQCLDYLRGRDAKARKLTDTIEHEGALPVHAVRPMRADRVDLERAIARLPPGYRAAFVLHDVEGFEHQEVANILGIAEGTSKSQVHKARMKIREYLVAAPPLEAAGRSRA*