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S1-18-all-fractions_k255_4237707_1

Organism: S1-18-all-fractions_metab_conc_83

partial RP 27 / 55 MC: 1 BSCG 29 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3..293)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKY0_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 100.0
  • Bit_score: 116
  • Evalue 9.00e-24
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 100.0
  • Bit_score: 116
  • Evalue 2.60e-24
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 100.0
  • Bit_score: 116
  • Evalue 1.30e-23

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 291
GTGTCTTCACACGCACGCAAGTTGCTCCCCGCGGAGGTGCTGACGCATCCCTCCATCACGGCCCTGGTCGCCAGCGCCACCCCCCACGGCACCGTGTCCCCCGTTGACGTACGACGGGCCAGTGACGAGGCGGGGGTCGAGCCCAAGCACCTGAAGGCACTCCTGGTGCACCTCAGCGGCCTCGGCATCTCCGTCCAGATCGATGCCACCGGGCTCCGGGCGGTCGCCGCCACCAGCAAGCGCGCGGCCACGTCGTCGGCGGCCAAGAAGGCCCCGGCGAAGAAGGCGGCC
PROTEIN sequence
Length: 97
VSSHARKLLPAEVLTHPSITALVASATPHGTVSPVDVRRASDEAGVEPKHLKALLVHLSGLGISVQIDATGLRAVAATSKRAATSSAAKKAPAKKAA