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S1-18-all-fractions_k255_3813619_8

Organism: S1-18-all-fractions_metab_conc_83

partial RP 27 / 55 MC: 1 BSCG 29 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(4223..4390)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 54.0
  • Bit_score: 110
  • Evalue 1.00e-22
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 54.0
  • Bit_score: 110
  • Evalue 5.10e-22
DNA-directed RNA polymerase subunit alpha n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0T6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 54.0
  • Bit_score: 110
  • Evalue 3.70e-22

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 168
CTCGACATCCGCAACTTCGGCGCGAAGTCCATCGACGAGGTGAAGGCCAAGCTCGTCGAGATGGGCCTCTCGCTCAAGGACAGCGCGCCCGGCTTCGACCCCCACGCCGCCCTCGCCGCCTACGGCGACGATGACGACGATGCTTTCATCGAGGACGAACAACTCTGA
PROTEIN sequence
Length: 56
LDIRNFGAKSIDEVKAKLVEMGLSLKDSAPGFDPHAALAAYGDDDDDAFIEDEQL*