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S1-18-all-fractions_k255_5646550_5

Organism: S1-18-all-fractions_metab_conc_83

partial RP 27 / 55 MC: 1 BSCG 29 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2489..3724)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Actinopolymorpha alba RepID=UPI000376A807 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 410.0
  • Bit_score: 621
  • Evalue 4.80e-175
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 404.0
  • Bit_score: 616
  • Evalue 4.30e-174
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACQ80344.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 404.0
  • Bit_score: 616
  • Evalue 2.20e-173

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Taxonomy

Beutenbergia cavernae → Beutenbergia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
GTGACCGTCGACGAGGTCATCACCCGGGTCCACCGCGACGAGTGGGCCCGGGTGGTGGCCACGCTCGCCCGACGCTTCGGCGACCTCGACATCGCCGAGGAGGCCGCGGCCGAGGCGTTCGCCGTCGCCGTCGAGCGCTGGCCCGCGGACGGCGTACCTCCCAACCCGGGCGCCTGGCTGACCACCACGGCCGGCAACAAGGCCCTGGACCGGCTCCGTCGCGAGAGCAAGCGCGACGCCAAGCACCGGCAGGCACTCATGATCGACCAGTCCTCATCCCCGCCCGAGCCGATCGGCGCCATCGCGGACGAGCGCCTCCGGCTCGTCTTCACCTGCGCGCACCCCGCCCTCGCCATGGAGGCGCGACTCGGCCTGACCCTCCGCATGGTCGGTGGCCTGACGGTGCCGGAGATCGCCCGCGCGTTCCTCGCGCCCGAGACGACGATGGCGCAGCGCATCACCCGTGCCAAGGCCAAGATCAAGGCCGCCGGGATCCCGTGGAAGGTCCCGGACGCCGACGACCTCCCGACCCGCGTCGCTGGCGTGCTGGCCGTGCTGTACCTCGTCTTCAACGAGGGCTACCTCGCCAGCAGTGCCGAGGCCGACCCGATCCGGGCCGACCTGACCGCCGAGGCCGTACGCCTCACCCGGCTGGTGCGCGAGCTCCTGCCCGACGACGGCGAGGTCGTCGGCCTGCTGGCGCTCATGCTGCTCATCGAGGCACGACGCGAGGCACGGGTCTCGGCGCACGGCGAGCTGGTCACCCTCGACCAGCAGGACCGCGGCTCCTGGGACCGCGCGCTGATCGCCGAGGGTCACGCCCTGGTGCGCGAACGGCTGGCGTCGGGCCAGCGACCCGGTCGCTACCAGGTGCTCGCCGCCATCAACGCGGTCCACACCGACGCCCACGACGCCCGGGACACCGAGTGGGACCAGGTCGTCGCGCTCTACGACCAGCTGGTCGTCCTGGACCCCTCACCGGTCGTGGCACTCAACCGCGCGATCGCGGGGGCCGAGCTCGACGGACCGTACGTCGCGCTCGCGCAGGTGGACGCGCTCACCGAGCCGCTCGACGGCTACCACGCCTTCCACGCCACCCGGGCCGACCTGCTGCGCCGCCTGGGCCGCAGCGCGGACGCGAGGGCGGCGTACGACCGCGCCATCGAGCTGGCCGGCAACACCGCGGAGTCGGCGTACCTCACCCGCCGTCGCGACGAGCTCGGCTCGGGTCAGTAG
PROTEIN sequence
Length: 412
VTVDEVITRVHRDEWARVVATLARRFGDLDIAEEAAAEAFAVAVERWPADGVPPNPGAWLTTTAGNKALDRLRRESKRDAKHRQALMIDQSSSPPEPIGAIADERLRLVFTCAHPALAMEARLGLTLRMVGGLTVPEIARAFLAPETTMAQRITRAKAKIKAAGIPWKVPDADDLPTRVAGVLAVLYLVFNEGYLASSAEADPIRADLTAEAVRLTRLVRELLPDDGEVVGLLALMLLIEARREARVSAHGELVTLDQQDRGSWDRALIAEGHALVRERLASGQRPGRYQVLAAINAVHTDAHDARDTEWDQVVALYDQLVVLDPSPVVALNRAIAGAELDGPYVALAQVDALTEPLDGYHAFHATRADLLRRLGRSADARAAYDRAIELAGNTAESAYLTRRRDELGSGQ*