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S1-18-all-fractions_metab_conc_83

wsip-metawrap-drep-bins_Nocardioides_71_3
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Nocardioides  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 1-50 of 717 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S1-18-all-fractions_k255_2228846
Species: Nocardioides sp. CF8 (100%)
1 2822 bp 72.50 2.07 99.93
S1-18-all-fractions_k255_2260736
Species: Intrasporangium calvum (100%)
1 2663 bp 73.79 2.65 99.92
S1-18-all-fractions_k255_5409270
Species: Nocardioides sp. CF8 (100%)
1 2186 bp 72.87 2.68 99.91
S1-18-all-fractions_k255_2913318
Species: Nocardioides sp. CF8 (100%)
1 2255 bp 70.02 4.06 99.91
S1-18-all-fractions_k255_5590003
Species: Tetrasphaera japonica (100%)
1 4814 bp 73.02 4.30 99.96
S1-18-all-fractions_k255_3544907
Species: Nocardioides sp. CF8 (100%)
1 2649 bp 74.90 1.47 85.39
S1-18-all-fractions_k255_3615357
Species: Nocardioides sp. CF8 (100%)
2 2105 bp 71.83 1.07 87.36
S1-18-all-fractions_k255_3618239
Species: Cellulomonas carbonis (50%)
2 2078 bp 70.74 3.25 96.15
S1-18-all-fractions_k255_3743783
Species: Nocardioides sp. CF8 (100%)
2 2058 bp 73.13 2.48 98.98
S1-18-all-fractions_k255_4125019
Species: Mycobacterium tuberculosis (50%)
2 2280 bp 71.32 1.91 87.37
S1-18-all-fractions_k255_14907
Species: Nocardioides sp. CF8 (50%)
2 3364 bp 73.37 0.71 99.52
S1-18-all-fractions_k255_1335645
Species: Nocardioides sp. CF8 (100%)
2 2838 bp 72.59 4.18 100.00
S1-18-all-fractions_k255_1348693
Species: Nocardioides sp. CF8 (100%)
2 4074 bp 70.67 1.77 98.90
S1-18-all-fractions_k255_4375046
Species: Gordonia sp. NB4-1Y (50%)
2 2157 bp 73.62 1.81 99.58
S1-18-all-fractions_k255_7105909
Species: Nocardioides sp. CF8 (100%)
2 2311 bp 71.27 1.43 90.48
S1-18-all-fractions_k255_7121162
Species: Streptosporangium roseum (50%)
2 2420 bp 70.21 2.05 98.93
S1-18-all-fractions_k255_383432
Species: Nocardioides sp. CF8 (100%)
2 2869 bp 73.09 1.78 98.19
S1-18-all-fractions_k255_4559933
Species: Nocardioides sp. JS614 (50%)
2 3362 bp 69.90 2.19 96.73
S1-18-all-fractions_k255_520937
Species: Nocardioides sp. CF8 (50%)
2 2682 bp 70.84 2.57 95.64
S1-18-all-fractions_k255_2054499
Species: Mumia flava (50%)
2 2198 bp 71.75 1.50 96.09
S1-18-all-fractions_k255_4590402
Species: Nocardioides sp. JS614 (50%)
2 5256 bp 67.22 46.80 98.34
S1-18-all-fractions_k255_7491786
Species: Nocardioides sp. CF8 (100%)
2 2136 bp 70.18 1.76 92.98
S1-18-all-fractions_k255_2131114
Species: Streptomyces bottropensis (50%)
2 2123 bp 70.51 1.63 90.72
S1-18-all-fractions_k255_2184894
Species: Nocardioides sp. CF8 (50%)
2 2883 bp 74.44 2.55 100.31
S1-18-all-fractions_k255_795417
Species: Nocardioides luteus (50%)
2 2495 bp 70.94 5.35 91.86
S1-18-all-fractions_k255_2323457
Species: Nocardioides sp. CF8 (50%)
2 2029 bp 72.99 1.11 100.10
S1-18-all-fractions_k255_2325683
Species: Nocardioides sp. CF8 (100%)
2 4946 bp 71.41 1.91 94.62
S1-18-all-fractions_k255_2326956
Species: Nocardioides sp. CF8 (100%)
2 2619 bp 71.78 2.69 95.19
S1-18-all-fractions_k255_4959613
Species: Tetrasphaera elongata (100%)
2 2047 bp 71.08 2.27 100.10
S1-18-all-fractions_k255_2333334
Species: Nocardioides sp. CF8 (100%)
2 2452 bp 74.06 2.02 99.84
S1-18-all-fractions_k255_2423097
Species: Pimelobacter simplex (50%)
2 3171 bp 69.54 4.82 93.57
S1-18-all-fractions_k255_2540103
Species: Nocardioides sp. CF8 (100%)
2 2167 bp 68.90 1.25 91.92
S1-18-all-fractions_k255_2599925
Species: Nocardioides sp. JS614 (50%)
2 3244 bp 72.63 3.38 97.84
S1-18-all-fractions_k255_2644212
Species: Nocardioides sp. JS614 (50%)
2 2066 bp 70.18 3.19 96.56
S1-18-all-fractions_k255_5280566
Species: Saccharothrix sp. ST-888 (50%)
2 2502 bp 71.26 1.56 99.40
S1-18-all-fractions_k255_5392267
Species: Nocardioides sp. CF8 (100%)
2 2374 bp 74.14 2.02 94.90
S1-18-all-fractions_k255_2909361
Species: [Cellvibrio] gilvus (50%)
2 4732 bp 70.67 1.81 96.30
S1-18-all-fractions_k255_5530377
Species: Nocardioides sp. CF8 (100%)
2 2084 bp 72.98 1.30 97.89
S1-18-all-fractions_k255_2936894
Species: Nocardioides sp. CF8 (100%)
2 2031 bp 70.95 1.40 85.82
S1-18-all-fractions_k255_3015592
Species: Nocardioides sp. CF8 (100%)
2 2636 bp 71.89 1.42 75.23
S1-18-all-fractions_k255_3271470
Species: Nocardiopsis alba (50%)
2 2173 bp 72.76 2.00 93.60
S1-18-all-fractions_k255_5933521
Species: Beutenbergia cavernae (50%)
2 2883 bp 71.18 2.24 95.42
S1-18-all-fractions_k255_3347099
Species: Nocardioides sp. CF8 (100%)
2 2309 bp 73.06 3.70 99.52
S1-18-all-fractions_k255_5951854
Species: Nocardioides sp. JS614 (50%)
2 2497 bp 70.12 3.30 96.00
S1-18-all-fractions_k255_6044209
Species: Nakamurella multipartita (50%)
2 2707 bp 72.96 2.22 100.07
S1-18-all-fractions_k255_3521830
Species: Nocardioides sp. JS614 (50%)
2 2046 bp 72.34 1.61 97.95
S1-18-all-fractions_k255_6168148
Species: Nocardioides sp. CF8 (66.67%)
3 2948 bp 72.15 1.32 88.94
S1-18-all-fractions_k255_3699201
Order: Micrococcales (66.67%)
3 3691 bp 71.06 1.75 94.12
S1-18-all-fractions_k255_3734496
Class: Actinobacteria (66.67%)
3 2795 bp 70.41 1.88 93.06
S1-18-all-fractions_k255_6240503
Species: Nocardioides sp. CF8 (66.67%)
3 2225 bp 71.55 2.02 95.06
Displaying items 1-50 of 717 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.