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S2-16-all-fractions_k255_5052313_6

Organism: S2-16-all-fractions_conc_23

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 4289..5578

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PNI8_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 427.0
  • Bit_score: 523
  • Evalue 1.40e-145
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EMD26108.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 427.0
  • Bit_score: 523
  • Evalue 2.00e-145
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 429.0
  • Bit_score: 518
  • Evalue 1.70e-144

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Taxonomy

Amycolatopsis azurea → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGGAACGGGAAAGCCGTCCGCTGGAGGACCTGCTGCGCACCCTCGCGCCGCAGGTCCTCGGCATGCTTGCCCGCCGGCATGGCCAGTTTGATCCGTGCGAGGACGCCGTGCAGGAGGCGCTGCTGGAAGCCTCCCTCAGCTGGCCTCGGGACGGCATTCCGGATAATCCCCACGGGTGGCTGATGACGGTGGCCGGGCGACGCCTGGTGGATCAGTGGCGCAGCGAGAGCGCCCGGCGCCGTCGGGAAGAATCGTTCGTCCTGGAGTCTTCCGTGTTGCAGGCAGGAGCCGTGTCCACGCCCGGGGAGCCTGCCTGGGAGCATCGGGAGTACGACGGCGGCGTGGCACCTGACACCGATGACACCCTGACGCTGCTGTACTTGTGCTGCCATCCGGCACTTTCGCCGCCGTCGCAGCTTGCCCTGACGCTGCGTGCCGTCGGCGGCCTGACCACCGCTGAAATCGCCAGCGCTTTCCTTGTTCCCGAGGCCACCATGGCGCAGCGGATCAGCCGGGCAAAGGGCACCATCACCCGTGCCGGCGCCCGATTCGAAGCCCCGGATCCTGACGAGGTCATGGCGAGGACCGCCGTCGTCCAGCAGGTCATCTACCTGATCTTCAACGAAGGTTATGCCGCGAGTTCAGGGCCTTCCCTGCAACGCTCAGACCTGACCGTCGAGGCCATCCGGCTTGGCCGTCTACTGCTGGATCTCATCCCGGCGGCGTCACCCGCCAGGGGTGAAACGTGCGGCCTGCTGGCACTGATGTTGCTGACGGATGCCCGGAACTCCGCCCGAACCCTGCCCGACGGCGCCCTGGTGCCGCTCGCTGAACAGGACCGCACTCTTTGGGACGCCGCCCGGATCCGGGAAGGCGTTGCGCTTTTGACCGGCGCGTTGGGCAAAACCCCGGTGGGTCCCTACCAGTTGCAGGCCGCCATCGCGGCAATCCACGACGAAGCGCCCAGCGCCGAAGATACTGACTGGCCGCAGATCCTGGCCCTTTACGACGTGCTGGAGCGGATTGCCCCGAGCCCGGTGGTCACACTGAACCGTGCCGTAGCGGTGGCCATGGTGAAGGGGCCCCTCGCGGGTTTGGCGGTGCTGGGCACTATCGAAGGGGATCCGCAGCTCACCCGCAGCCATCGGCTTGATGCAGTGCGGGCACACCTTCTCGAACTGTCAGGTGACGCGGCGGCGGCGCGCCAGGCCTATCTCCGCGCTGCAGGTTCGACGGCGAGCCTGCCCGAGCGCCGCTACCTCGCCGCACGGGCGGCTCGGCTGGGTTAA
PROTEIN sequence
Length: 430
MERESRPLEDLLRTLAPQVLGMLARRHGQFDPCEDAVQEALLEASLSWPRDGIPDNPHGWLMTVAGRRLVDQWRSESARRRREESFVLESSVLQAGAVSTPGEPAWEHREYDGGVAPDTDDTLTLLYLCCHPALSPPSQLALTLRAVGGLTTAEIASAFLVPEATMAQRISRAKGTITRAGARFEAPDPDEVMARTAVVQQVIYLIFNEGYAASSGPSLQRSDLTVEAIRLGRLLLDLIPAASPARGETCGLLALMLLTDARNSARTLPDGALVPLAEQDRTLWDAARIREGVALLTGALGKTPVGPYQLQAAIAAIHDEAPSAEDTDWPQILALYDVLERIAPSPVVTLNRAVAVAMVKGPLAGLAVLGTIEGDPQLTRSHRLDAVRAHLLELSGDAAAARQAYLRAAGSTASLPERRYLAARAARLG*