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S2-16-all-fractions_k255_6228601_13

Organism: S2-16-all-fractions_metab_conc_34

near complete RP 41 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 10676..11776

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9P2_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 366.0
  • Bit_score: 708
  • Evalue 2.00e-201
putative FliA/WhiG subfamily RNA polymerase sigma -28 subunit similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 366.0
  • Bit_score: 708
  • Evalue 5.70e-202
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily {ECO:0000313|EMBL:ADB73755.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 366.0
  • Bit_score: 708
  • Evalue 2.80e-201

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
GTGAACCACCTCCCTGCCACCCCCGCCGTCGACACCGCTCCGGCCCGCCCGCGCGAGCCGCTGGTCTTCGGTGGCATCCCCGAGGCCGAGGGCTGGGCCCTCGCGCCCATCACGGCCCGCGACCGGGTGCACTTCCGGACCGACCGCGAGCTGCCCCTCGAGGAGTTCCGCCGCGAGCTGCCCGACGGGGTGACGGTCAGCTACGACCAGGGCGAGGGGCTCTACCGCGTCGACGGCGCCTGCGGCACCGCCTCCGTGCTCGCCGAGTGGGTCCGGGCCTGGTGCGCCGGGCGGGGGACGGCGACCGTGGGGCTGCGCGCGGAGACCGACGTCCGCCGCCGCGCGCCGCGCGACCTGCCCCCGGCCTTTCTCGACGAGCTGTGCCGGCACTACCTCCCGGTCAGCCTCAAGCGGCTGCAGCGCAACTCCAGCACCCTGCGGCTGCACGTGCCCGACCCCGACGACCTCACCCAGCAGGTGAGCGAGTGGATCCTCAAGGCGGTCGGCCAGTTCGACGAGGGCAAGGGCGTGCCCTTCGGCGCCTTCCTCGCCACCCAGCTGTCGAAGTGGGTGCACGACCTGGGCCGCAACGCCCACGGCCGCACCGCCGCCGACACCGAGAACAAGCAGCAGAAGGCGGTCGCCGCCTTCCTCGCCGAGCACCAGCGGCGGCCCAGCGAGAAGGAGCTGGCCGCGTACATGGGGCAGAGCGTGGCGACGCTGCGCCGCAACTCGCAGACGGTGGCGACCCTCAACGGGCTGCGCAACCTGCAGTCCCTGGACGGCGTCGGCCCGGACGGCACCGAGATCATGCTGCCGGACGCGCACGAGGCGCCGGACGAGATCATGGGCGAGGCCGAGCAGACCCTGCTGTCGCACGCGCTGACCGCGGCGTGCGCGCCGGACCCCGACGCGCGACCGGACCAGCGGGCCGGGCAGCCCAACGTCCTGGGCTGGGCGACGTGGTACCTGACCACCTGGGGCGGTCGGACGAAGACGCAGCTGTCGGCCGATCTGGGGACCTCGGTGCGCAACATGAACGTGCACGCCGACCGCGTCGAGCGGGCGCTCAGGGCGCATCTGGCCGAGCTCGCGGACTGA
PROTEIN sequence
Length: 367
VNHLPATPAVDTAPARPREPLVFGGIPEAEGWALAPITARDRVHFRTDRELPLEEFRRELPDGVTVSYDQGEGLYRVDGACGTASVLAEWVRAWCAGRGTATVGLRAETDVRRRAPRDLPPAFLDELCRHYLPVSLKRLQRNSSTLRLHVPDPDDLTQQVSEWILKAVGQFDEGKGVPFGAFLATQLSKWVHDLGRNAHGRTAADTENKQQKAVAAFLAEHQRRPSEKELAAYMGQSVATLRRNSQTVATLNGLRNLQSLDGVGPDGTEIMLPDAHEAPDEIMGEAEQTLLSHALTAACAPDPDARPDQRAGQPNVLGWATWYLTTWGGRTKTQLSADLGTSVRNMNVHADRVERALRAHLAELAD*