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S2-16-all-fractions_k255_3175614_12

Organism: S2-16-all-fractions_metab_conc_50

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 9 / 38
Location: 12825..13421

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D563_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 167.0
  • Bit_score: 140
  • Evalue 1.20e-30
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 194.0
  • Bit_score: 145
  • Evalue 1.40e-32
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 194.0
  • Bit_score: 145
  • Evalue 6.80e-32

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAGTAACGGATTGTGTCGACCGGTGTCGGCCTCACTCGCCGGTGACAGTTTTGACAACGTGGTCCTGCCGCATCTCGATGCTGCGTGCCGGCTGGCGCGACACCTGATGCGCAATCAGCACGATGCGGAAGACGCCGTTCAGGAGGCGTCGCTGCGGGCCTTCCGATACTTCCGCACTTTCAGCGGCGGGAACGGGCGTGCATGGTTTCTGAGGATCGTTCGCAACACCTGTCACGGCTGGCGCGGTCACAGCGTGCGGGTAGCCACCGAATCCTTCGACGAGGCGCAGCACAGCCAGGCGGGGCCGGCGAACGATCCAGAAATGCTGGCGCTGCGGAGCGATGACGTCGTGCTGATCGAGCAGGCGCTGCGGCATGTGCCGGATCGGGGTCGTGCGCTGCTGATGCTCCGCGAGTTCGATGGGCTGTCCTACCGTGAGCTCTCCCAGGCGATGGGCATGCCGATCGGCACGGTGATGTCCACCCTGTCGCGCGCCCGCCGGGTGTTCCGGGAGGCGCTGGAGAGCCAGACACGGCGTGCGATGCCGGTTGAAACCGGGCGAGAGCGCGAGCGCGAGCCGGGCGCGCTGGTGTGA
PROTEIN sequence
Length: 199
MSNGLCRPVSASLAGDSFDNVVLPHLDAACRLARHLMRNQHDAEDAVQEASLRAFRYFRTFSGGNGRAWFLRIVRNTCHGWRGHSVRVATESFDEAQHSQAGPANDPEMLALRSDDVVLIEQALRHVPDRGRALLMLREFDGLSYRELSQAMGMPIGTVMSTLSRARRVFREALESQTRRAMPVETGREREREPGALV*