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S2-16-all-fractions_k255_1130236_9

Organism: S2-16-all-fractions_metab_conc_50

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 9 / 38
Location: 8812..9693

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554557 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 278.0
  • Bit_score: 223
  • Evalue 2.10e-55
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 271.0
  • Bit_score: 158
  • Evalue 2.30e-36
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 281.0
  • Bit_score: 246
  • Evalue 3.20e-62

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGGTTGCCAGGACCTTCCTACGTTCGTCGCTGCACAGGCGCGCCTGATCGCGCGGCTGTACGCCCGGAGCGGGGCCGAACGCTGGGCGTTGTCGCAGGAGTCGCTCGCACAGGCGCTGCACCAAAGCACCACACATCGGTTCCCCGACGGAGCCACTGAGGGCGAGGTGGCGCGGTATCTCGCGACGGTGCACGTGGAGGACCTCGCCCTCGCGGCCGCATGCCGGGAGGGAAACGGGGCCGCATGGGACCACTTCGTCCTGCACTTCCGTCCGGCGCTGTACGCCGCGGCCCGGAGCGTGGCCGGAGACGCCCACCGCGACCTGGCCGATTCGCTGTATGCGGAGCTCTATGGCGTGTCCAATGCCGGCGAGGAGCGTACCTCGCTGCTCGCCTGGTACCACGGGCGCAGCCGTCTTCTCACCTGGGTCCGCTCCGTGCTGGTGCAGCGTCACATCGACGCGCGCCGCGCCGCCTCCCGCACCGAACAGTGGGACCCCGACGACGAGAGCGCCCCCGGAGGACGCGAACGTGGGTACGCGTCGACGCCTGACCCCGGTCGGGCGCACGCGGTCGCCATCGCGCAGGACGCGCTCGATCGAGCGATCGCCGCACTGGATGCACGGGACCGCCTGCGCCTGCGGCTGTATTACGGCGAGGATCTCACCCTGGCCCAGGTCGGGCGGATCACCGGCGAGCACGAGGCGACGGTATCGCGCAAGCTCGATCGGGCGCGCGCGGACCTCCGGCGGCGCGTCGAACGACACCTCCGCGCCGAACACGGCCTGAGTGATGCCGCCATCGCCGAGTGCTTCGCATACGCCGCGGCGGCTCCCGAGCTTCACCTCACCCGCCTGCTCTCGAGAGCCGATGACGGTTGA
PROTEIN sequence
Length: 294
MGCQDLPTFVAAQARLIARLYARSGAERWALSQESLAQALHQSTTHRFPDGATEGEVARYLATVHVEDLALAAACREGNGAAWDHFVLHFRPALYAAARSVAGDAHRDLADSLYAELYGVSNAGEERTSLLAWYHGRSRLLTWVRSVLVQRHIDARRAASRTEQWDPDDESAPGGRERGYASTPDPGRAHAVAIAQDALDRAIAALDARDRLRLRLYYGEDLTLAQVGRITGEHEATVSRKLDRARADLRRRVERHLRAEHGLSDAAIAECFAYAAAAPELHLTRLLSRADDG*