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S2-18-all-fractions_k255_82763_39

Organism: S2-18-all-fractions_metab_27

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(36939..38138)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IXQ1_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 398.0
  • Bit_score: 649
  • Evalue 2.10e-183
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 398.0
  • Bit_score: 649
  • Evalue 5.90e-184
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADP80210.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 398.0
  • Bit_score: 649
  • Evalue 2.90e-183

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
GTGGCCGGCGAGCCGACGTCGGCGTGGGACGAGGGCGCGCTGCGCGCCCTCGTCCCGCGGGTGCTCGCGGGGCTCGTGCGGCGGGGCGAGCGGTTCGACGCCGCCGAGGACGCCCTCCAAGAGGCGTTGCTGGAGGCGCTGCGGGTCTGGCCCGAGCATCCGCCGCGCGACCCGCGCGCCTGGCTGAGCACCGTGGCGACCCGGCGGCTCCTCGACGCCCGCCGCAGCGAGGCCGCCCGTCACCGCCGCGAAGAGGAGGCGGAGGCCGAGCCGCGGCCCGAGGCCGGGTCGGAGGAGGTCGGCGACGACACGCTCTTCCTGCTCTTCCGCTGCTGCCACCCGGCGCTCGCGCCGGCCTCGCAGGTGGCGCTGACGCTGCGCGCGGTCGGCGGCCTCACGACGCGCGAGATCGCCGACGCCTTCTACGTCCCAGAGGCGACGATGGCGCAGCGGATCAGCCGCGCCAAGCGGACGCTGCGGGGGCGCCGGCTGGACCGGCCCGGCGACCTCGCCGTCGTTCTGCGGGTGCTCTACCTCGTCTACACGACCGGTCACGCGGGCCGGGTCGACCTGGCCCGCGAGGCGATCCGCCTCGCCCGCCAGCTGACGCTCGCGACCGAGGAGCCGGAGGCGCGCGGTCTGCTCGCGCTGATGCTGCTCAACCACGCGCGCTTGCCCGCGCGGGTCGACGCCGAGGGCCGCCTCGTCACGCTCGACCGGCAGGACCGCGGCCTGTGGGCCAGACGCGAGATCGCCGAGGGCGTGCGCGTCCTGCAGTCGGCGCTGGCGCTGCGGACCGAGGCGCGGCCGCCGGGCCGCTACCAGCTCGAGGCCGCCATCGCCGCCCTGCACGACGACGCCGCGAGCGCCGAGGAGACCGACTGGCCGCAGATCCTCTCCTGGTACGACGACCTCGTCGCGCTCGCCGACGACCCGGTCCGCGAAGACCCCGCCGCCGTCCTCGGGCGCGCTGTCGCGGTCGGCCACGTCCACGGCGCCGCCGCCGGCCTGCGCGAGAGCGACCGCCTGCGCGACGTGCTCGGCGAGCGCCATCGCTGGCACGCCGTCCGCGGTCACCTGCACGAGCTGAACGGCGACCTCGCCGCCGCCGCGGAGGCCTACGCCGAGGCCGCCCGCCGCGCCACGACCGTCGCCGAGCGCGATCACCTCGTCCGCCAGGCGGCGCGGGCGCGGCGGTGA
PROTEIN sequence
Length: 400
VAGEPTSAWDEGALRALVPRVLAGLVRRGERFDAAEDALQEALLEALRVWPEHPPRDPRAWLSTVATRRLLDARRSEAARHRREEEAEAEPRPEAGSEEVGDDTLFLLFRCCHPALAPASQVALTLRAVGGLTTREIADAFYVPEATMAQRISRAKRTLRGRRLDRPGDLAVVLRVLYLVYTTGHAGRVDLAREAIRLARQLTLATEEPEARGLLALMLLNHARLPARVDAEGRLVTLDRQDRGLWARREIAEGVRVLQSALALRTEARPPGRYQLEAAIAALHDDAASAEETDWPQILSWYDDLVALADDPVREDPAAVLGRAVAVGHVHGAAAGLRESDRLRDVLGERHRWHAVRGHLHELNGDLAAAAEAYAEAARRATTVAERDHLVRQAARARR*