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S3-16-all-fractions_k255_4020356_23

Organism: S3-16-all-fractions_conc_3

near complete RP 48 / 55 BSCG 49 / 51 MC: 4 ASCG 11 / 38
Location: 27937..28566

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigM n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RDX8_MYCPH similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 177.0
  • Bit_score: 100
  • Evalue 1.40e-18
RNA polymerase sigma factor SigM {ECO:0000313|EMBL:EID09331.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 177.0
  • Bit_score: 100
  • Evalue 2.00e-18
RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 204.0
  • Bit_score: 98
  • Evalue 1.60e-18

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Taxonomy

Mycobacterium phlei → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGCCCCTACCGATCGTCAGAACGGCTCGCGCCGTCGTCTCTAGATGTGTGACCCGCGACGTCGAGGACGCTGCGCTCGTTGAGCATGCGATGGCCGGCGACGCCGAGGCGTTCGCACTGCTCTATTACCGCTACCGCCTCGACGTCTGGAACATGGCGTGGTTCCACCTGCGCAACCACCACGAGGCAGAGGACGCCGCGCAGGAGACGTTCCTGCGCGCGCACCGCGGGCTTGGGCAGTACCACCGCAGCGAGGACGCGCTGCGCCCCTGGCTGCTGACGATCTGCCGCAACGTCTGCGTCGACCGCATCCGCGCGACCCGGCGGCGGCCGGTGCTGTCGTGGGAGGACGAGCAGGTCGAGGAACCAGCCGCGCGGCTCGCCGACCCCGACCAGCAGATCGACTTCCGGCGCGCCCTCGCCACGCTCCCGTCCGAGGTGCTGGAGGCCTTCTACGTCGTCGACGTGATGGGCTTCCACAGCGACGAAGCCGCGCGCATCCTCGGGCTGCGGGCGGCCTCCACGCTGCGCTCGCGCGTCGCCCGCGCCCGCCGTATGCTCGCGCCGACGCTTGCCGACCCGCCGCAGCTCGTCCAGCCGGTCGCGCTCGCGAGAGAGTCGCTGGCATGA
PROTEIN sequence
Length: 210
MPLPIVRTARAVVSRCVTRDVEDAALVEHAMAGDAEAFALLYYRYRLDVWNMAWFHLRNHHEAEDAAQETFLRAHRGLGQYHRSEDALRPWLLTICRNVCVDRIRATRRRPVLSWEDEQVEEPAARLADPDQQIDFRRALATLPSEVLEAFYVVDVMGFHSDEAARILGLRAASTLRSRVARARRMLAPTLADPPQLVQPVALARESLA*