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S3-16-all-fractions_k255_5854437_4

Organism: S3-16-all-fractions_conc_3

near complete RP 48 / 55 BSCG 49 / 51 MC: 4 ASCG 11 / 38
Location: 1788..2987

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8G6_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 393.0
  • Bit_score: 526
  • Evalue 2.00e-146
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KJK45954.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 393.0
  • Bit_score: 531
  • Evalue 6.80e-148
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 393.0
  • Bit_score: 526
  • Evalue 5.70e-147

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
GTGGTAGCGACCCTCGACCGGGTCTTCCGCGAGCAGTGGGGCTATGTGCTCGCAGCCCTGATCGGCTTCCTCGGCGACTTCGACCTCGCCGAGGAGGCCGCACAGGAGGCGTTCGCGGTCGCCGCGGAGCGCTGGCCGCGCGACGGCGTGCCATCGAGCCCGGGCGTCTGGCTGGTCTCGACGGCGCGCAATCGCGCGATCGACCGGCTGCGCCGGCAGCGGACGCTGGCGGAGAAGGTCCGCCTGCTGGAGGGACCTGTGTCCTACGAGGACCAGCTGGAGGAGACGACCTTCCCCGACGAGCGGCTGGAGCTGCTCTTCACCTGCTGCCATCCGGCGCTGGCGGTGGACGCGCAGGTCGCATTGACCTTGCGCACGCTCGGCGGCCTGACCACCACCGAGATCGCCCGCGCGTTCCTGGTGCCCGAGCCGACGATGGCACAGCGGCTGGTGCGCGCCAAGCGCAAGATCAAGGCCGCCGGGATCCCCTTCCGGGTCCCGCCCGGCCGCCTGCTGCCGGAGCGGCTGGCGGCGGTGCTCGCGGTCGTCTACCTGGTCTTCAACGAGGGATACTCGGCCCCGCCCGCCCGCGGCGAGCTGTCCTCCGAGGCGCTGCGGCTCGGGCGGGCGCTCGCCGAGCTGATGCCGGACGAGGCCGAGGTGCACGGCCTGCTGGCGATGATGCTGCTGCACGACTCGCGCCGCGCCGCGCGCGTGCGCGGCGGAGAGCTGGTGCTGCTCTCGGAACAGGACCGCACGCTGTGGGACATGGCGGAGATCGCTGCCGGGCGGGCGGCGCTGGATCGTGCGCTGGCGCTGCGCGGCGGCCACGGTCCGTACGTGCTCCAGGCAGCGATCGCCTCGCTGCACCTGGAAGCGGAGCGCGACTGGCCGGAGATCGCCGCGCTCTACGGCGAGCTGGCTTCGTTGACCGGCTCCCCGGTCGTGGAGCTGAACCGCGCGGTCGCCGTGGGCGAGGCCGAGGGCCCCGCGGCGGGGCTTGCGCTGATCGATCGCCTCGACGGCCTCGACGGCTACCGCTACCTCCACTCCGCGCGCGCCGAGCTGCTGCGGCGACTGGGGCGGACGGAGGAGGCGCGCACGGCGTACCGCCGCGCACTGGAGCTCATGGAGGACGAGCGGGAGCGCCGTCTGCTCGAGCGCCAGCTGGCGCGGCTCGATGCCGCCGCGGACCGCTGA
PROTEIN sequence
Length: 400
VVATLDRVFREQWGYVLAALIGFLGDFDLAEEAAQEAFAVAAERWPRDGVPSSPGVWLVSTARNRAIDRLRRQRTLAEKVRLLEGPVSYEDQLEETTFPDERLELLFTCCHPALAVDAQVALTLRTLGGLTTTEIARAFLVPEPTMAQRLVRAKRKIKAAGIPFRVPPGRLLPERLAAVLAVVYLVFNEGYSAPPARGELSSEALRLGRALAELMPDEAEVHGLLAMMLLHDSRRAARVRGGELVLLSEQDRTLWDMAEIAAGRAALDRALALRGGHGPYVLQAAIASLHLEAERDWPEIAALYGELASLTGSPVVELNRAVAVGEAEGPAAGLALIDRLDGLDGYRYLHSARAELLRRLGRTEEARTAYRRALELMEDERERRLLERQLARLDAAADR*