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S3-16-all-fractions_k255_755468_1

Organism: S3-16-all-fractions_metab_conc_49

partial RP 22 / 55 BSCG 22 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(13..894)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJK55418.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 294.0
  • Bit_score: 310
  • Evalue 2.40e-81
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1247227 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 288.0
  • Bit_score: 309
  • Evalue 2.90e-81
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 301.0
  • Bit_score: 305
  • Evalue 1.20e-80

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Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGAGCGAGGACGCGGTACGAGCGGAGCTGCTGGCCGAGCAGTTCGAGACGCACCGCGCGCACCTGCGGGCGGTCGCGCAGCGGGTGCTCGGCTCCAGGGACGAGGCGGACGACGCCGTCCAGGAGGCATGGCTGCGCCTGCAGCGCACCGGATCCACCGGCGTGGACAACCTCGGCGGCTGGCTGACCACGGTCGTCGGCCGCGTCTGCCTCGACGTGCTGCGCCGCCGGGCCGCGCGCCGCGAGGAGCCGCTGGAGCTGCGCCCGTCGGATCCCGGGGGCGGGCCCGAGCCAGAACACGAGGCGGTGCTGGCCGACTCCGTCGGCCTCGCGCTCCTCGTCGTGCTCGACACGCTGACGCCGCCCGAGCGGCTCGCCTTCGTGCTGCACGACCTGTTCGCCGTCCCGTTCGACGATGTCGCGGCAGTCCTCGACCGCAGTCCGGCTGCGACGCGCCAGCTGGCCAGCCGCGCCCGGCACCGGGTGCAGAACGCGGCTCCGGGCGCCGCCGGCCCCACGGACGCCGGGCGCCGTCAGGAGGTGGTGCAGGCGTTCCTCGCCGCTGCGCGCAACGGCGACTTCGCGGAGCTGCTGGTCGTGCTCGACCCGCACGTCGTGCTCCGCGCCGGCGCCGCCGTCCCCGCCCTCGGCGGGCTCGAGCGGCTCAGCGGTCACGAGGCGGTCGCCCGCGCCTTCCTCGGCAAGGCCCGGGCCGCACGCGCCGCGCTGCTCGACGGCGCTCCCGGCGCTGTGTTCACGCTGGACGGCCGACTGCGGGGAGCGCTGGAGTTCGTCGTCTCGGGTGGCCGGATCACCGCCGTCGAGGTCATCTCCGACCCCTCCGTCCTCGCCGCCCTCGACGTCGTGCTGGTCGAGACCTGA
PROTEIN sequence
Length: 294
VSEDAVRAELLAEQFETHRAHLRAVAQRVLGSRDEADDAVQEAWLRLQRTGSTGVDNLGGWLTTVVGRVCLDVLRRRAARREEPLELRPSDPGGGPEPEHEAVLADSVGLALLVVLDTLTPPERLAFVLHDLFAVPFDDVAAVLDRSPAATRQLASRARHRVQNAAPGAAGPTDAGRRQEVVQAFLAAARNGDFAELLVVLDPHVVLRAGAAVPALGGLERLSGHEAVARAFLGKARAARAALLDGAPGAVFTLDGRLRGALEFVVSGGRITAVEVISDPSVLAALDVVLVET*