ggKbase home page

S3-16-all-fractions_k255_1997064_20

Organism: S3-16-all-fractions_metab_conc_49

partial RP 22 / 55 BSCG 22 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(17715..18515)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDZ4_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 266.0
  • Bit_score: 492
  • Evalue 2.20e-136
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 266.0
  • Bit_score: 492
  • Evalue 6.10e-137
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 266.0
  • Bit_score: 492
  • Evalue 3.00e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 801
GTGACCGAGGCCGCCACCAACCGGCTCGACGAGACCCCGGACGACGCCGACGCCGTGCTGGCCGACCTGTGGGCCGGCTACGTCGCCGACCGGGCGCCCGAGCTGCGCGACCGGCTGATCCTGCACTACGCGCCGCTGGTGAAGTTCGTCGCCGGCCGCGTCGGCAGCGGCCTGCCCGCGCACGTCGAACAGGCCGACCTGGTCTCCTACGGCACCTTCGGCCTCATCGACGCCATCACCCGCTACCAGCCCTCGCGTGAGGTCAAGTTCGAGAGCTACGCGATGGCCCGCATCCGCGGCGCGATCATCGACGAGCTGCGCAGCACCGACTGGATCCCGCGGTCGGTGCGCATGAAGGCACGGCAGTTCGAGCGCACCGTGGCGGCGCTGGAGAGCCGGCTGCAGCGCAGCCCCACCGAGGAGGAGGTGGCCGCCGAGATGGGGATGGACGTCGAGGAGGTCCGCAAGTTCCTCGGCCAGCTCTCGCTGGTCAACGTCGTCGCGCTCGACGAGCTGCTCTCCGACGACGAGGGCGGCGCACCCCGCCTGGTCGACACCCTGCAGGACACCAGCGCGCTGGACCCGCAGGCGATGGCCGAGCACAGCGAGGCCCGGCAGCTGCTGGCCCGCGCCGTCGAGCAGCTGCCCGAGCGGGAGAAGGTCGTCGTCAGCCTGTACTACTTCGAGGGCCTGACCCTGGCCGACATCGGCCGCGTCCTCGGCGTCACCGAGAGCCGCATCTGCCAGCTGCACACCAAGGCGGTGCTGCAGCTGCGCACCAAGCTCGCCGACATCGCCTGA
PROTEIN sequence
Length: 267
VTEAATNRLDETPDDADAVLADLWAGYVADRAPELRDRLILHYAPLVKFVAGRVGSGLPAHVEQADLVSYGTFGLIDAITRYQPSREVKFESYAMARIRGAIIDELRSTDWIPRSVRMKARQFERTVAALESRLQRSPTEEEVAAEMGMDVEEVRKFLGQLSLVNVVALDELLSDDEGGAPRLVDTLQDTSALDPQAMAEHSEARQLLARAVEQLPEREKVVVSLYYFEGLTLADIGRVLGVTESRICQLHTKAVLQLRTKLADIA*