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S3-16-all-fractions_k255_4882317_3

Organism: S3-16-all-fractions_metab_conc_49

partial RP 22 / 55 BSCG 22 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1468..2715)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Saccharopolyspora erythraea D RepID=T2S6Q2_SACER similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 415.0
  • Bit_score: 637
  • Evalue 6.50e-180
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:EQD87119.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 415.0
  • Bit_score: 637
  • Evalue 9.10e-180
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 415.0
  • Bit_score: 627
  • Evalue 2.50e-177

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Taxonomy

Saccharopolyspora erythraea → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGACCGCTCCGGACCAGCAGGTTCGTGCGGCGGTCGAGGCGGCGTACCGCGCCGAGTGGGGCCAGCTGGTCGCGACCCTGATCGGGGTGACCGGGGACTGGGACCTGGCCGAGGACTGTGCGCAGGAGGCATTCGAAGCCGCCCTCGCCACCTGGCCGCGCGACGGCGTCCCACGCCGTCCGGGTGCGTGGCTGACCACGGCTGCCCGCAACCGCGCGACCGACCGGCTGCGCCGCGCCGCCGCCGGCGCCGCCAAGTTGCGCCAGGTCGCCGTGCTCGAACGCGACCCGGACCAGCCGCCGGTGAAGGGGATCCCCGACGACCGGCTGCGGCTGATCTTCACGTGCTGTCATCCCGCGCTACCGTTCCCGGCGCGGGTCGCACTCACGCTGCGGACGCTGGTCGGCATGAACACCGCCGAGATCGCCCGGGCGTTCCTGACGGCCGAGCCGGCGATGGCCCAACGCCTCGTCCGCGCCAAGCGCAAGATCCGAGAGGCCGGCATCCCGTACCGGGTGCCGCCTGCCGAACTGCTTCCGCAGCGGCTCGCCGCGGTCCTCGCGGTGCTCTACCTGATCTTCAACCAGGGCTATGACGAGGTCCCCGGCGAGGGCTCCACGAACGAGGCCGCGAGCCGGGGCCTGACAGCCGAGGCGATCCGGCTGGCCCGGGTTCTGGTCGGGCTGATACCGCACGAGCCGGAGCCGCGGGGGCTGCTCGCCCTGATGCTCTTGCACGAAGCCCGGCGTGCGACGCGCACCGAGGACGGGGTGCTGGTCCCGTTGGAGGACCAGGACCGGTCCCGCTGGGCCCAGGCCCAGATCAGCGAGGGCGTGGCGGTGCTCGACCAGGCGCTGGCGGTGCGGCGGGCCGGGCCGTACCAGGTGCAGGCCGCGATCGCCGCCTGCCACGCCACCGCGCCGGACGCGGCGAGCACCGACTGGCCGCAGATTGCGATCCTGTACGCCGAGCTGGCGCGGCTCGCGCCGTCCCCGGTGGTGGAGCTCAACCGGGCGGTCGCGGTCGCGATGACCGACGGCGTCGAGGCCGGGCTGCGGCTGGTCGACGACCTCGCCGCCTCCGGCCGGCTCGAGGGGTACCACCTGCTGCTGCCCGCCACCCGGGCCGACCTGCTGCGCCGCGCCGGTCGGCCGGACGCCGCGAGAGCCGCCTACGAGCAGGCCCTGGCCCTGGCCCCGACCGAGGCCGAGCGCCGCTACCTGGCGCGCCGCCTGCGCGAGCTGTGA
PROTEIN sequence
Length: 416
MTAPDQQVRAAVEAAYRAEWGQLVATLIGVTGDWDLAEDCAQEAFEAALATWPRDGVPRRPGAWLTTAARNRATDRLRRAAAGAAKLRQVAVLERDPDQPPVKGIPDDRLRLIFTCCHPALPFPARVALTLRTLVGMNTAEIARAFLTAEPAMAQRLVRAKRKIREAGIPYRVPPAELLPQRLAAVLAVLYLIFNQGYDEVPGEGSTNEAASRGLTAEAIRLARVLVGLIPHEPEPRGLLALMLLHEARRATRTEDGVLVPLEDQDRSRWAQAQISEGVAVLDQALAVRRAGPYQVQAAIAACHATAPDAASTDWPQIAILYAELARLAPSPVVELNRAVAVAMTDGVEAGLRLVDDLAASGRLEGYHLLLPATRADLLRRAGRPDAARAAYEQALALAPTEAERRYLARRLREL*