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S3-16-all-fractions_metab_conc_49

wsip-metawrap-drep-bins_Geodermatophilus_obscurus_74_7
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Geodermatophilus obscurus  →  Geodermatophilus  →  Geodermatophilales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 51-100 of 569 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S3-16-all-fractions_k255_4599615
Species: Geodermatophilus obscurus (100%)
5 3836 bp 74.66 9.15 94.79
S3-16-all-fractions_k255_3115037
Species: Geodermatophilus obscurus (80%)
5 3861 bp 74.80 9.21 94.17
S3-16-all-fractions_k255_1215306
Species: Geodermatophilus obscurus (71.43%)
7 3864 bp 72.85 5.36 76.16
S3-16-all-fractions_k255_2820794
Species: Geodermatophilus obscurus (100%)
4 3893 bp 75.31 7.21 91.86
S3-16-all-fractions_k255_2517635
Species: Geodermatophilus obscurus (60%)
5 3930 bp 73.94 7.14 79.85
S3-16-all-fractions_k255_4744940
Species: Geodermatophilus obscurus (100%)
5 3952 bp 74.65 9.41 95.95
S3-16-all-fractions_k255_5538293
Order: Geodermatophilales (80%)
5 3967 bp 70.83 10.59 73.51
S3-16-all-fractions_k255_1958669
Species: Geodermatophilus obscurus (80%)
5 3969 bp 75.86 7.41 92.82
S3-16-all-fractions_k255_1877570
Species: Geodermatophilus obscurus (100%)
6 3979 bp 73.84 10.97 87.31
S3-16-all-fractions_k255_465918
Species: Geodermatophilus obscurus (100%)
4 3984 bp 75.48 6.93 81.85
S3-16-all-fractions_k255_5024801
Species: Geodermatophilus obscurus (75%)
4 3993 bp 75.28 6.05 92.41
S3-16-all-fractions_k255_331580
Class: Actinobacteria (60%)
5 3994 bp 75.76 5.75 90.29
S3-16-all-fractions_k255_2692430
Species: Geodermatophilus obscurus (100%)
3 3998 bp 73.76 8.37 89.97
S3-16-all-fractions_k255_1260138
Species: Geodermatophilus obscurus (100%)
3 4006 bp 71.29 11.98 92.19
S3-16-all-fractions_k255_2904826
Species: Geodermatophilus obscurus (80%)
5 4008 bp 73.00 13.21 87.35
S3-16-all-fractions_k255_3872629
Species: Geodermatophilus obscurus (50%)
4 4025 bp 76.35 7.23 79.45
S3-16-all-fractions_k255_1320876
Species: Janibacter sp. HTCC2649 (66.67%)
3 4034 bp 74.10 5.02 97.87
S3-16-all-fractions_k255_3655417
Species: Geodermatophilus obscurus (100%)
6 4061 bp 75.20 6.46 83.77
S3-16-all-fractions_k255_4432603
Species: Geodermatophilus obscurus (100%)
3 4105 bp 71.62 14.91 91.57
S3-16-all-fractions_k255_2384190
Species: Geodermatophilus obscurus (50%)
6 4107 bp 75.63 6.83 95.40
S3-16-all-fractions_k255_2768790
Class: Actinobacteria (80%)
5 4112 bp 69.33 10.21 79.67
S3-16-all-fractions_k255_4797720
Species: Geodermatophilus obscurus (80%)
5 4138 bp 75.18 5.98 83.81
S3-16-all-fractions_k255_5665877
Species: Geodermatophilus obscurus (100%)
4 4139 bp 73.83 7.36 96.47
S3-16-all-fractions_k255_755468
Class: Actinobacteria (83.33%)
6 4143 bp 74.73 4.63 92.98
S3-16-all-fractions_k255_4201618
Genus: Streptomyces (50%)
4 4145 bp 72.67 7.31 86.63
S3-16-all-fractions_k255_471684
Species: Geodermatophilus obscurus (100%)
6 4146 bp 72.99 5.57 91.10
S3-16-all-fractions_k255_6320872
Species: Geodermatophilus obscurus (66.67%)
6 4177 bp 75.84 6.97 87.77
S3-16-all-fractions_k255_3835940
Species: Streptomyces fradiae (83.33%)
6 4179 bp 71.91 6.60 95.26
S3-16-all-fractions_k255_2436397
Species: Geodermatophilus obscurus (100%)
6 4195 bp 75.95 7.51 88.03
S3-16-all-fractions_k255_1388774
Class: Actinobacteria (50%)
6 4213 bp 73.01 30.51 90.79
S3-16-all-fractions_k255_814939
Species: Geodermatophilus obscurus (100%)
3 4223 bp 74.43 8.06 95.97
S3-16-all-fractions_k255_1667925
Species: Geodermatophilus obscurus (50%)
4 4236 bp 74.48 10.59 90.09
S3-16-all-fractions_k255_5965842
Species: Geodermatophilus obscurus (100%)
7 4250 bp 75.62 6.32 85.55
S3-16-all-fractions_k255_1002437
Species: Geodermatophilus obscurus (100%)
5 4269 bp 72.45 5.69 92.13
S3-16-all-fractions_k255_3691365
Order: Geodermatophilales (60%)
5 4276 bp 72.38 12.70 93.52
S3-16-all-fractions_k255_3915276
Species: Geodermatophilus obscurus (75%)
4 4296 bp 74.46 8.03 94.76
S3-16-all-fractions_k255_1331601
Species: Geodermatophilus obscurus (100%)
6 4317 bp 75.89 9.17 96.73
S3-16-all-fractions_k255_6390170
Order: Pseudonocardiales (60%)
5 4319 bp 71.64 6.56 75.50
S3-16-all-fractions_k255_3000144
Class: Actinobacteria (100%)
5 4353 bp 69.91 7.00 73.26
S3-16-all-fractions_k255_6142596
Species: Geodermatophilus obscurus (75%)
4 4371 bp 73.48 8.30 97.67
S3-16-all-fractions_k255_5905500
Species: Geodermatophilus obscurus (100%)
4 4379 bp 74.56 7.84 94.06
S3-16-all-fractions_k255_1190350
Class: Actinobacteria (80%)
5 4390 bp 73.37 10.90 97.38
S3-16-all-fractions_k255_4540594
Order: Pseudonocardiales (50%)
4 4411 bp 74.47 6.46 88.69
S3-16-all-fractions_k255_4716102
Order: Geodermatophilales (60%)
5 4415 bp 73.16 7.30 85.82
S3-16-all-fractions_k255_2325592
Species: Geodermatophilus obscurus (83.33%)
6 4415 bp 76.47 7.34 86.91
S3-16-all-fractions_k255_3140148
Species: Geodermatophilus obscurus (85.71%)
7 4434 bp 73.57 5.75 95.53
S3-16-all-fractions_k255_462065
Species: Geodermatophilus obscurus (80%)
5 4440 bp 76.71 7.70 91.76
S3-16-all-fractions_k255_2169445
Species: Geodermatophilus obscurus (83.33%)
6 4454 bp 75.68 8.49 90.59
S3-16-all-fractions_k255_2447528
Species: Geodermatophilus obscurus (66.67%)
6 4454 bp 76.02 5.32 92.21
S3-16-all-fractions_k255_746319
Species: Geodermatophilus obscurus (83.33%)
6 4455 bp 75.69 8.11 89.09
Displaying items 51-100 of 569 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.