ggKbase home page

S3-16-all-fractions_k255_2673497_63

Organism: S3-16-all-fractions_metab_conc_57

near complete RP 29 / 55 MC: 1 BSCG 17 / 51 MC: 2 ASCG 37 / 38
Location: comp(55304..55897)

Top 3 Functional Annotations

Value Algorithm Source
rlmE; ribosomal RNA large subunit, methyltransferase E (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 198.0
  • Bit_score: 318
  • Evalue 1.20e-84
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 198.0
  • Bit_score: 318
  • Evalue 5.80e-84
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMJ8_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 198.0
  • Bit_score: 318
  • Evalue 4.10e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 594
ATGAGACTTGCTGACGCTCGACGTGACCAATACCGGCGACTGGCAAAGGATCAGGGATACCGGGCAAGGTCAGCTTACAAGCTGCTGCAGATGAACCGCTCTTATAACATTATCAAAAAGGGTGATAAGGTAGTTGACCTTGGGTGTGCACCAGGAGGGTGGCTGCAGGTAGCCGTGAAGGAAGTAAGGTCGTCAGGGAAGGTCATCGGGATAGACCTCAAGCCGGTTACACCAATTGCTGATGCAATAATTCTGCAGGGCAGCATAGAGGATCCAAACATGCTAAGCAAAATATCTAAAATTTTAGGCTGCAAGGCTGATGTTGTCCTCTCAGATTTAGCTCCCAATGTGAGCGGCGTATGGGATATAGATCATGCAAGGCAGATCTCTCTTTCCACGATTGCGTTACGGTTTGCACAGCATGTGCTGAGAATAGGCGGAAGCAGCGTGTTCAAGGTGTTTGAGGGCGACATGCTAGAGGAATTCAGATCGGAATTACGGAAGAGCTTTGGCAAAGTGCTTTTAAACAAACCTTCTGCAAGTCGACAAGAGAGTAGTGAATTATATATCGTCTGCTTAAACTTCAAACAATGA
PROTEIN sequence
Length: 198
MRLADARRDQYRRLAKDQGYRARSAYKLLQMNRSYNIIKKGDKVVDLGCAPGGWLQVAVKEVRSSGKVIGIDLKPVTPIADAIILQGSIEDPNMLSKISKILGCKADVVLSDLAPNVSGVWDIDHARQISLSTIALRFAQHVLRIGGSSVFKVFEGDMLEEFRSELRKSFGKVLLNKPSASRQESSELYIVCLNFKQ*