ggKbase home page

S3-16-all-fractions_k255_1182727_5

Organism: S3-16-all-fractions_metab_conc_63

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: 2568..3065

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UQF1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 161.0
  • Bit_score: 207
  • Evalue 8.60e-51
RNA polymerase sigma-E factor {ECO:0000313|EMBL:EGD44711.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 161.0
  • Bit_score: 207
  • Evalue 1.20e-50
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 161.0
  • Bit_score: 167
  • Evalue 2.10e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardioidaceae bacterium Broad-1 → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGATCACGGACGACGAAGCTGGGTTCGATGCCTTCGTGGCGGGGCGCAGTGCTGCGCTGTCGCGGACGGCGTACCTGCTCACGGGTGACCACCACCTCGCCCAGGACCTGGTGCAGGCCGCACTGCTGCAGGCGGCGAAGCACTGGAGCCGGATCCACACCTCGCCGGAGGCGTACGTCCGGCGCGCGATGTACCACCAGAACATCTCCTGGTGGCGCCGCCGCAAGCTCGCCGAGTCGCCTCTCGCCTCCCATGACGGGGCCGCCGCCGCGGCCGACACCGACCTGCGGCTCACCCTCGACCAGGCGCTCGCCCGCCTGACGCCCAAGCAGCGCACCGTGCTGGTGCTGCGCTTCTACGAGGACCTCACGGAGGTGGAGACGGCGCGCGCGCTCGGGATCTCCGCCGGCACCGTGAAGTCCACCAGCCGCCAGGCGCTGGCCCGGCTCCGGGCGCTCGCGCCCGAGCTCGCCGAGCTGATCGGAGCAGACGCATGA
PROTEIN sequence
Length: 166
VITDDEAGFDAFVAGRSAALSRTAYLLTGDHHLAQDLVQAALLQAAKHWSRIHTSPEAYVRRAMYHQNISWWRRRKLAESPLASHDGAAAAADTDLRLTLDQALARLTPKQRTVLVLRFYEDLTEVETARALGISAGTVKSTSRQALARLRALAPELAELIGADA*