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S3-16-all-fractions_k255_5152193_2

Organism: S3-16-all-fractions_metab_conc_63

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: comp(652..1209)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 183.0
  • Bit_score: 303
  • Evalue 1.40e-79
Peptide deformylase n=1 Tax=Nocardioides sp. CF8 RepID=R7XU99_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 183.0
  • Bit_score: 303
  • Evalue 9.90e-80
formylmethionine deformylase similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 182.0
  • Bit_score: 283
  • Evalue 3.00e-74

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGGCATCAACTCCCGGGTCCTGGAGTGGACCGAGTCGGACCTCGGCGTGGCCGGGTCGCTGCGCGACGTCGTACGCGCTCCCGCCGGCGTGCTGTCCACGCTCGGTGACACCGTCGATCCGACGGCGCCCGAGGTCGTGCAGCTGGCCGCCGACCTCGTCGCGACCATGCGCGTCTCCCCGGGCTGCGTCGGCCTGGCCGCGCCCCAGGTGGGCGTCGGGGTCAAGGTGTTCTGCGTCGACGTGTCCGAGCACCCCAAGGCCCGCGACCACCACGGCACCTTCGTGCTCTGCAACGCCGAGGTCGTCTCCGGCAGCCGCAACGAGAAGGCCCGCGAGGGCTGCATGTCCGTCCCCGACTTCACCGGTGACGTCAAGCGCCCCAGCCGGGTCGTCGTACGAGGCCGGCTCCCCGGCTCCGGCGAGGAGGTCGAGATCGAGGCGGAGGCCTTCGAGGCGCGTGCCCTGCAGCACGAGATCGACCACTGCGACGGGCTGCTCTTCCTCGACCGCGCGGCCGGGGCGCACGCCGTCTACGCTCGCAAGACGTACCTGTAG
PROTEIN sequence
Length: 186
MGINSRVLEWTESDLGVAGSLRDVVRAPAGVLSTLGDTVDPTAPEVVQLAADLVATMRVSPGCVGLAAPQVGVGVKVFCVDVSEHPKARDHHGTFVLCNAEVVSGSRNEKAREGCMSVPDFTGDVKRPSRVVVRGRLPGSGEEVEIEAEAFEARALQHEIDHCDGLLFLDRAAGAHAVYARKTYL*