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S3-16-all-fractions_k255_5733959_1

Organism: S3-16-all-fractions_metab_conc_63

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: comp(3..215)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 125
  • Evalue 1.50e-26
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 69.0
  • Bit_score: 121
  • Evalue 7.60e-26
tRNA pseudouridine synthase B n=1 Tax=Nocardioides sp. CF8 RepID=R7XVA8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 125
  • Evalue 1.10e-26

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGTCGACCCCGGTCTGGTCGTCGTCGACAAGGCCCCCGGGATGACGTCGCACGACGTCGTGGCCCGGGTACGCCGGTTGGCGGGCACCCGCAAGGTCGGTCACGCCGGCACGCTCGACCCGATGGCCACCGGCGTGCTGGTGCTCGGGGTCGATCGCGCCACCCGGCTGCTGGGGCACCTCATGCTGACCGAGAAGTCCTACGACGCCACC
PROTEIN sequence
Length: 71
MVDPGLVVVDKAPGMTSHDVVARVRRLAGTRKVGHAGTLDPMATGVLVLGVDRATRLLGHLMLTEKSYDAT