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S3-16-all-fractions_k255_2634011_4

Organism: S3-16-all-fractions_metab_conc_63

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: comp(3954..4487)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 type 2 n=1 Tax=Nocardioides sp. CF8 RepID=R7XXD3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 180.0
  • Bit_score: 240
  • Evalue 7.60e-61
Sigma-70, region 4 type 2 {ECO:0000313|EMBL:EON23660.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 180.0
  • Bit_score: 240
  • Evalue 1.10e-60
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 171.0
  • Bit_score: 172
  • Evalue 5.50e-41

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGACCCGACGCGACCCGGCGGCCTTCGCCGAGTTCGTGGCTGCGCGGTCCGCGTCGCTGCACCGGACGGCGTACCTCCTGGTCGGCGACCGCCAGCTGGCACAGGACCTGCTGCAGGAGGCGCTCACCAAGACGTACGTCGCCTGGCCGCGGCTGCGTGACACGAGCAAGGCCGAGGCCTACACGCGCAAGGCGATCACCACCACCGCGATCACGTGGTTCCGCCGCCGCAGCTGGAGTGAGCGTCCGACCGACACGGTGCCGGAGCGCGGCCGGGCCGACCTCGTCGACGAGCTGACCACACGCGACCTGCTGTGGGACGCGCTGCAAGCCCTCCCGCCCCGGCAGCGGGCCGCGATCGTGCTCCGCTTCTACGAGGACCTCTCCGAGGCCCGCACCGCCGAGGTCCTCGGCTGTGCGCCCGGAACCGTCAAGAGCCAGGTCTCGGCCGGGCTCCGCAAGCTCCGCGACCACCTGGGCGAGCGCGCCGAGGGCGCCGACCTGCCCCTGCACCTGCTGGAGGTGTCCCGATGA
PROTEIN sequence
Length: 178
MTRRDPAAFAEFVAARSASLHRTAYLLVGDRQLAQDLLQEALTKTYVAWPRLRDTSKAEAYTRKAITTTAITWFRRRSWSERPTDTVPERGRADLVDELTTRDLLWDALQALPPRQRAAIVLRFYEDLSEARTAEVLGCAPGTVKSQVSAGLRKLRDHLGERAEGADLPLHLLEVSR*