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S3-18-all-fractions_k255_1428633

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_1428633_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1..1080)
DNA (1080bp) protein (360aa)
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBY2_SINAD
hypothetical protein
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain {ECO:0000313|EMBL:AGA26181.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
S3-18-all-fractions_k255_1428633_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(1210..2148)
DNA (939bp) protein (313aa)
Putative signal protein with GAF, PAS(PAC) and GGDEF domains n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWS6_9GAMM
diguanylate cyclase
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_1428633_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2145..3359)
DNA (1215bp) protein (405aa)
Metal dependent phosphohydrolase id=4510911 bin=GWC2_Nitrospirae_57_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cyclic diguanylate phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_1428633_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3356..5422)
DNA (2067bp) protein (689aa)
HEAT-like repeat-containing protein id=2927943 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_1428633_5
unknown

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comp(5582..5947)
DNA (366bp) protein (122aa)

This feature has no annotations

S3-18-all-fractions_k255_1428633_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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6286..8412
DNA (2127bp) protein (709aa)
Glucose-methanol-choline oxidoreductase id=5026832 bin=GWA2_Ignavibacteria_55_11 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
GMC-family oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
S3-18-all-fractions_k255_1428633_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8513..10555
DNA (2043bp) protein (681aa)
Transketolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEC1_GEMAT
Transketolase {ECO:0000313|EMBL:AHG89069.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transketolase
S3-18-all-fractions_k255_1428633_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10693..11937
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RE63_CELLC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_1428633_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

12045..13706
DNA (1662bp) protein (554aa)
gvi:glr0480 thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=1247694 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
response regulator receiver protein
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_1428633_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

13721..15112
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003618898
histidine kinase
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_1428633_11
unknown

Not on your lists

15156..15332
DNA (177bp) protein (59aa)

This feature has no annotations

S3-18-all-fractions_k255_1428633_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15333..16172)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRW5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92295.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16324..16674
DNA (351bp) protein (117aa)
Pyrrolo-quinoline quinone n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSV3_9BACT
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EEF57090.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
S3-18-all-fractions_k255_1428633_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16732..18309
DNA (1578bp) protein (526aa)
Beta-lactamase domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HST6_9FIRM
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG89064.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18331..18960)
DNA (630bp) protein (210aa)
Protein of unknown function DUF3006
Uncharacterized protein {ECO:0000313|EMBL:AHG89063.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19094..19810)
DNA (717bp) protein (239aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
TonB family protein
TonB family protein {ECO:0000313|EMBL:AHG91155.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_17
unknown

Not on your lists

comp(19974..20522)
DNA (549bp) protein (183aa)

This feature has no annotations

S3-18-all-fractions_k255_1428633_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20844..22184)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38539.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_1428633_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22226..25321)
DNA (3096bp) protein (1032aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8I0_GEMAT
Putative outer membrane protein {ECO:0000313|EMBL:BAH38540.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
putative outer membrane protein
S3-18-all-fractions_k255_1428633_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25959..26708)
DNA (750bp) protein (250aa)
Glutamine amidotransferase class-I family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A843_GEMAT
glutamine amidotransferase class-I family protein
Glutamine amidotransferase class-I family protein {ECO:0000313|EMBL:BAH38403.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_1428633_21
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(26823..27974)
DNA (1152bp) protein (384aa)
carboxylate-amine ligase (EC:6.3.-.-); K06048 carboxylate-amine ligase [EC:6.3.-.-] id=14631533 bin=bin9_gal15 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
Carboxylate-amine ligase ybdK
Tax=CSP1_3_Armatimonadetes
S3-18-all-fractions_k255_1428633_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27986..29338)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A842_GEMAT
Circularly permuted ATP-grasp type 2
Circularly permuted ATP-grasp type 2 {ECO:0000313|EMBL:AHG87958.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29342..30304)
DNA (963bp) protein (321aa)
glutathione synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C532C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87959.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_24
unknown

Not on your lists

30635..30802
DNA (168bp) protein (56aa)

This feature has no annotations

S3-18-all-fractions_k255_1428633_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30799..31518)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4W7_CALAS
esterase
Esterase {ECO:0000313|EMBL:AHG87960.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31614..32492)
DNA (879bp) protein (293aa)
Putative esterase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BD84_MEISD
esterase
Esterase {ECO:0000313|EMBL:AHG87961.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32950..34155
DNA (1206bp) protein (402aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Histidine kinase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GW13_9GAMM
ATP-binding region ATPase domain protein
S3-18-all-fractions_k255_1428633_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(34184..34624)
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88743.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1428633_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34659..35732)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CMU5_MYXFH
Uncharacterized protein {ECO:0000313|EMBL:EYF02659.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying 29 items

View Taxonomy