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S3-18-all-fractions_k255_2234432_8

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 8410..11736

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 1128.0
  • Bit_score: 1680
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 1120.0
  • Bit_score: 1562
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 1128.0
  • Bit_score: 1680
  • Evalue 0.0

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3327
GTGGCGCTTCCTACGCTGATTGATGCGGTCGCCGGACTCCCGGCGTTCGCGCGCGTACTGAACACGATCCCCGAGCCTGGCCGTCGCCTCACGATTGGCGGACTACCCGGTTCGAGCGATGCCGTAGTGCTCGCGGCCCTGGTGCGTCGCCTGCCGACGCGGTTCTTCGTCGTGGTGACCGAAGGTGTGCCGCAGGCGGAGCGTTGGCTCGCCGATCTGCAAGCGATTCTCGACGAGACACCCGTCGCGCTGTATCCGCCGCGCGAAGGCTTCGGTGAGGCGGAGCCGCATGCCGAGATCGCGGGTGAGCGCGTCGAGACGCTGGAGCGCGTGTCGCGCGGTGACGTCCGGGTGCTCCTCACGACTGCGCGCGCGTTGCTGGAGCGAACGCGGCTTCCGACGACACTCCGCGGCGCCCGGCTGGAGATTCGGAAGGGAGACGTTAGGCGTCCCGAAGAGATCGCCGAACATCTGGAGCGCGTCGGATTCGAGCGCGTGCCGATGGTCGATGACGTCGCGCAGTTCTCGGTGCGCGGCGGGATCTTCGACATCTACGGGTTCGGCATGGCCGATCCGGTGCGCCTCGAGTTCTGGGGCGACGAGATCGTGGAGCTCCGCCATTTCGACCTGCACAGCCAGCGCTCCACGCGCGCAGCGGACGTCGCGATCATCCTGCCCGTGGATGGCCGCGCGCCCGACGAGGGCGAAGACGAGTTCGAGCGCGTATCCGTGTCGTCGTTGTGGCCACCGGAGACGGTCATCCTCATCCCGGGCGACGCCCACATCGAGCCCGAGCTCCAGCGCACGTGGGATGAGGCGCAGCATCACCTCGATCTCGCGCGGCGACGCGGCGAGGATGTCCCAGGTCGGCACGACCTGTTTCAGTCGCCAGCGGATGTGTCGCGATCACTCTCGGACTTCGGCACGATCGCCGTGCTCCCTGGCGCGGGAACCGGCGCCGACGCGGTGTTCCCGATCCGCCATCCGGATGCGATCGATCGCGACGTCAAGCGCCTCCGTCGCATCGTCCGTGACGGAATGCCGACCATCATTCTGTGCGACAACGAGGGTCAGGCCGAGCGTCTCGATGAGCTGCTGAACGAGGACACGTTTTCCCCATCCCCGGCCGCCCTGACGATTGGCGTGCTCGATGGCGGATTCGTGATCCCCGCCCAGGGTGAGGTCGATTCCCGATTCCCCATTCCCGATTCCCGACAAGGGATTCGCGTCCTCACCGACCACGAGATCTTCCGTCGTGAACGGCGCATCCGCCGCGCGCGACGGTACACGACGGGCGCGACGCTCGAGGCCATCACCGCGCTCAAGTCCGGTGACTTCGTGGTGCACCTCGAGCAGGGCGTCGGCATCTATCGCGGCCTGCAGACGATCTTCGTCGGTGAGAGCACGGTCGAAGTTGCCGTCATCGAGTACGAGGGCGGCGATCGTCTCAACGTCCCGCTCTATCGCATCGACCAGATCGAGCGATACCGCGCGGCCGGTGATGCCGATGGCGAGGCGCCTCCACCTCGACTCCACAAGCTGGGCGGCAAACGGTGGGCGCAACAGCGCGACCGGACCCGGGCAGCCATCCAGGAAATGACGGTCGAGCTGCTCGACCTGTACGCGCGCCGTCAGGTCGCGTCGCGGCCGCCGCATTTTCCCGATGGCGCCTGGCAGCGCCAGCTCGAGTCGTCATTCCTCTTCGAGGATACGCCGGATCAGCGCAAGGCGACCGTCGACGTCAAGACGGACATGGAGAAGCCTCGCCCGATGGACCGGCTGCTCGTCGGCGATGTCGGCTACGGCAAGACGGAGATCGCCGTTCGTGCGGCGTTCAAGGCGGTGCAGTCGGATCGGCAGGTTGCGATCCTCGTTCCGACGACGATTCTCGCAGACCAGCACCAGCGCACGTTCAGCGATCGCTTCGCGGACTTTCCGATTCGCGTCGCCGCCCTGAGCCGCTTTCAGTCGGCGAAGGAACAGGCCGATACGCTGGCGGAGTTGGCCGCGAAGAAGGTGGACATCGTCATCGGAACCCACCGCCTGCTGAGCCCCGACGTCAGGTTCGCGAACCTCGGCCTCATCGTCGTCGACGAGGAGCATCGCTTCGGCGTGAAGCACAAGGAGCGTCTCAAGCAGCTCCGGCTCGACACGGACGTGCTGACGCTCACGGCGACGCCCATCCCGCGAACGTTGCATCTCTCGCTCGCCGGGCTCCGCGACATGACGCTGATGCAGACTCCACCGCGCGACCGGTCGCCGGTGCTCACCTTCGTGGAGCCGTGGGATGAGTCGCTGATCGAGGAAGGAATCGCGCGGGAGCTCGACCGCGGCGGTCAGGTGTTTTTCGTCCACAATCGCATCGAGACCATCGAAGCCATCTCCGATCGCATTCGCCGTGTCGTGCCACGGGCTCGCGTTGCCGTCGGCCACGGGCAGATGCGCGAGCGCGATCTCGAGGATGTGATGCACCGGTTTGTGGCCGGCGAAGTCGACGTGCTCGTCTCGACGATGATCGTGGAGTCCGGCCTGGACGTGCCGAACGCGAACACCATGTTCGTGAACCGCGCTGATACGTTCGGTCTTGCCCAGCTGTACCAGCTGCGCGGTCGTGTCGGACGCTCGCATCGCCGCGCGTATTGCTATCTGATGGTGCCGGATGCCGTCGACCCCGATGCGGAGCGCCGGCTGCAGGTGCTGGAGCACCACACCGAGCTCGGTTCGGGTTACCGCGTCGCGCTCAAGGACCTCGAGCTCCGCGGTGCCGGCAACCTGCTCGGGCCGGAGCAGTCTGGGTTTGTGCACGCGGTCGGCTTCGATATGTACCTGCGCATGCTCGAGGAGACAGTCCGCCGCGTCATGGACGGGGGCGGTCAGCCGAAGCTGGTTCCGGCCGACGTCTCGCTCGACCTCCCAGCCTACCTGCCCGATGACTATATCCCGTCGCAGGACGCCAAGCTCGACGTCTATCGCCGGTTGAGCGCGCTTCACGCGCCGGAATCCATCGAGGAGCTCCGTGCCGAGGTGCGCGACCGGTTCGGCCCGCTACCTCCGCCTGCCGAAGCGTTCTTTGCGACCGCGACTCTCCGTGTCGTAGGAGGCGCACTCGGAATCGATGGCCTCTTGGTGCGCGGCGACGAAGCCCGTGTTACTTTTCGCGACACAGCTGTTCCCCGGATGAAGGGGCTCTCGGCCGCGTTCCATGAGGTGCAGTTCCAGGCCGAGGTGCGTCGCACGCACCCGCTTTCGCTCAAATTGACACGTGTCGGCGGTTCAGCCATCCTCGACGGGCTCGTCCGTGCTCTCAGAGGTTTGGCCGTCGCGTGA
PROTEIN sequence
Length: 1109
VALPTLIDAVAGLPAFARVLNTIPEPGRRLTIGGLPGSSDAVVLAALVRRLPTRFFVVVTEGVPQAERWLADLQAILDETPVALYPPREGFGEAEPHAEIAGERVETLERVSRGDVRVLLTTARALLERTRLPTTLRGARLEIRKGDVRRPEEIAEHLERVGFERVPMVDDVAQFSVRGGIFDIYGFGMADPVRLEFWGDEIVELRHFDLHSQRSTRAADVAIILPVDGRAPDEGEDEFERVSVSSLWPPETVILIPGDAHIEPELQRTWDEAQHHLDLARRRGEDVPGRHDLFQSPADVSRSLSDFGTIAVLPGAGTGADAVFPIRHPDAIDRDVKRLRRIVRDGMPTIILCDNEGQAERLDELLNEDTFSPSPAALTIGVLDGGFVIPAQGEVDSRFPIPDSRQGIRVLTDHEIFRRERRIRRARRYTTGATLEAITALKSGDFVVHLEQGVGIYRGLQTIFVGESTVEVAVIEYEGGDRLNVPLYRIDQIERYRAAGDADGEAPPPRLHKLGGKRWAQQRDRTRAAIQEMTVELLDLYARRQVASRPPHFPDGAWQRQLESSFLFEDTPDQRKATVDVKTDMEKPRPMDRLLVGDVGYGKTEIAVRAAFKAVQSDRQVAILVPTTILADQHQRTFSDRFADFPIRVAALSRFQSAKEQADTLAELAAKKVDIVIGTHRLLSPDVRFANLGLIVVDEEHRFGVKHKERLKQLRLDTDVLTLTATPIPRTLHLSLAGLRDMTLMQTPPRDRSPVLTFVEPWDESLIEEGIARELDRGGQVFFVHNRIETIEAISDRIRRVVPRARVAVGHGQMRERDLEDVMHRFVAGEVDVLVSTMIVESGLDVPNANTMFVNRADTFGLAQLYQLRGRVGRSHRRAYCYLMVPDAVDPDAERRLQVLEHHTELGSGYRVALKDLELRGAGNLLGPEQSGFVHAVGFDMYLRMLEETVRRVMDGGGQPKLVPADVSLDLPAYLPDDYIPSQDAKLDVYRRLSALHAPESIEELRAEVRDRFGPLPPPAEAFFATATLRVVGGALGIDGLLVRGDEARVTFRDTAVPRMKGLSAAFHEVQFQAEVRRTHPLSLKLTRVGGSAILDGLVRALRGLAVA*