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S3-18-all-fractions_k255_2812380_10

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(9617..10165)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPU4_9BACT id=5223210 bin=16ft_combo_ws3_JS1 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 158.0
  • Bit_score: 135
  • Evalue 4.60e-29
rpoE5; RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 183.0
  • Bit_score: 116
  • Evalue 6.30e-24
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 158.0
  • Bit_score: 135
  • Evalue 6.50e-29

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 549
ATGCGTGGCTTCCCCGCCGACCTTCCGGATTCGGCATTGATCAGCCGGTTCCTCGGAGGGGATGAGGACGCGTTTCGCGCGCTGTATCAGCGACACACGCCTCGGCTGCGCATGCTCGTTATGCGGCTCCTCGGTGCCGCACGGCAGGACGACGTGGATGACGTGATGCAGGAGACGTGGCTGGCGGGTTGTCGCGGGCTGCACGGTTACAACGGCGACGCGCAATTCTCCTCGTGGCTCACGACGATCGGCGTTCGCGCCGCCTATGCGCGGTTCGGTCGCGCGGGTGAGATCGAAACGGAGCTGTTCGATGAGCTCGCGGCGCCAAGCGGCCCGGGGCCGGTGTCCGCGATCGATCTCGAGCGCGCACTGAGCCGGTTGTCCGACCGCCAACGGGTCGTCGTCGTGCTACACGACGTCGAGGGGTTCACGCATCAGGAGATCGCGCGCCAGCTGGGGATCGCCAGTGGCACGACGAAGGCCACGCTGTCACGTGCACGCTCGTTGTTGCGCCGACTGCTGAACGATGGAGTGTCCCATGTCGGATGA
PROTEIN sequence
Length: 183
MRGFPADLPDSALISRFLGGDEDAFRALYQRHTPRLRMLVMRLLGAARQDDVDDVMQETWLAGCRGLHGYNGDAQFSSWLTTIGVRAAYARFGRAGEIETELFDELAAPSGPGPVSAIDLERALSRLSDRQRVVVVLHDVEGFTHQEIARQLGIASGTTKATLSRARSLLRRLLNDGVSHVG*