ggKbase home page

S3-18-all-fractions_k255_2821681_34

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(35163..36362)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Alkalilimnicola ehrlichei (strain MLHE-1) RepID=Q0AAA0_ALHEH id=5225305 bin=16ft_combo_ws3_JS1 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 340.0
  • Bit_score: 228
  • Evalue 1.10e-56
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 357.0
  • Bit_score: 177
  • Evalue 6.50e-42
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 340.0
  • Bit_score: 228
  • Evalue 1.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCTGCCGTTGCTCGCGATCGCTACCGCTTGCGGTGACGCCCGCGGCGACGGAGGAAAAGCAATTGGCAAGAACGGAGGTAACGGAGGGCCGAACGGCGGTCCCGGCGGCGGCGGTCCCGGCGGTGGAGGTGGTCCTGGGGGCGGCAACCGCGGCAACAATCGGCCCTCGCCCGTCGAGGTAGTAACGGTCGGCCGCGGCACGTTGGCTCGAACGACCACGGTCGCCGGCATCCTCGAGCCGCTTCGTACGGTTGGCGTGAACGCCCAGATGTCGGGCGCCCTGCTCACGGTGAACGCCGAGGAAGGCACGTACGTGCGCGAGGGTCAGACGCTCGCGCAGATCGACGCTCGCGAGCTGGAGGCGCAGGTCAAGAGCGCGACCGCGTCGCTCGAACTCGCCGAATCGTCCGCGAAGCGCTCCGACGAGCTGTGGCGGCAACGCATTGTCACCGCACTCGAGTACGAGCGCGATAAGGCAGCACTCGCCGCCGCGCAGGCAACACTCGAACAGCTCAGGACACGACTCGGCTATGCGACCATCAAGTCGCCGATCAATGGCGTCGTGACCGAAAAGCGACTGGAGGCGGGTGACATCGTCTCGCCCCAGACGCGCCTGTTCTCCGTGGCCGAGACGTCCACGCTGGTGTCGCGCGTGATGGTGTCCGAGCTCGAGGTGCCGCTGCTCAGGGCTGGGGCTCAGGTCGACGTCAGCGTCGACGCGCTCGGCGGTGCTCGCGTGGCCGGACGTATCCGCCGCGTCTTCCCCTCGGCAGACACGCTCACCCGGCTCGTGCCGGTGGAAGTCGCGCTGACTGGCAGCGCGCTCAACCAGCTCAAACCGGGCTATACTATCAGATCCACGTTCCGGCTCGGCGAGCGCAACGACGCACTGCTCATTCCGACCCGCGCCGTGATGGGTCCGGCGGGCGCGCGCACTGTCGTGATCGTACGCCAGGGCAAGAGTGAGCGCCGCATCGTGCGCGTCGGTCCGGACATCGACGGCAAGACCGAAGTGCTCGAGGGACTCGCGGCTGGCGACTCGGTCATCGTCGCCGGCCAGGCGCTGCTCCGCGACGGGTCGACGGTGCGCATCGTGCCGCCCATGTCGCCCGGCGAAACCTCCCCGCCGAGCACGGAATCGCCAGCGGCAGCGGCCGCAACTCCGGTCTCTCGCACACCGGCAAGGACCTCCGAATGA
PROTEIN sequence
Length: 400
MLPLLAIATACGDARGDGGKAIGKNGGNGGPNGGPGGGGPGGGGGPGGGNRGNNRPSPVEVVTVGRGTLARTTTVAGILEPLRTVGVNAQMSGALLTVNAEEGTYVREGQTLAQIDARELEAQVKSATASLELAESSAKRSDELWRQRIVTALEYERDKAALAAAQATLEQLRTRLGYATIKSPINGVVTEKRLEAGDIVSPQTRLFSVAETSTLVSRVMVSELEVPLLRAGAQVDVSVDALGGARVAGRIRRVFPSADTLTRLVPVEVALTGSALNQLKPGYTIRSTFRLGERNDALLIPTRAVMGPAGARTVVIVRQGKSERRIVRVGPDIDGKTEVLEGLAAGDSVIVAGQALLRDGSTVRIVPPMSPGETSPPSTESPAAAAATPVSRTPARTSE*