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S3-18-all-fractions_k255_3348517_3

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 1549..2217

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG7_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 211.0
  • Bit_score: 164
  • Evalue 8.60e-38
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 212.0
  • Bit_score: 283
  • Evalue 3.60e-74
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89420.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 212.0
  • Bit_score: 283
  • Evalue 1.80e-73

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 669
GTGTACGACATGTCAAACGCCTTGAATCATCCGATGGAAGGGCAGCTCACGGACGGGAGCGTGACCGCAGAGGCCGCGATCCCGCTCGGGGCGGACGAGTTCCAGGTGGCGCTCGTGGCCGTCCTGCCGTCGGCGTACGGGTATGCCTTGCGCCTCACGCGCAACACGGCCGACGCCGAGGATCTCGTACAGGACACGGCACTGCGTGCGTTCCGGGCGAAGAGTCAGTTCGAGCCCGGCACGAACTTCAAGGCGTGGGTCTTTCGTATTCTCACTCGCTGCTTCTGGGCGAATCACCGACGCCGCCAGCGGCGACCGAACACCGTCGACTTCGATGACACACCGGACCTGTACCTCTACGCGCGCTCGGCCGAGCACGGACTTCCGTGGGAGGGGGAAGATCCAGCGAGAACGCTCATCGATCGCCTTGGCACGGAGCGAGTCGCCGAGTCGATCGGCCAGCTCCCCGAGGAGTACGGCGTCGTGTGTACGCTCTACTTCATGGAGGACTTCGCCTATCACGAGATTGCGGACGTGCTCGAGGTTCCCGTGGGCACCGTTCGCTCGCGACTCCATCGCGGGCGGAAGATGTTGCAGAAGGCCCTCTGGTGTCTCGCCGAGGAGTCGGGGATCGTGACCGAGCTGACGCAACAGGAGGGCGACGCATGA
PROTEIN sequence
Length: 223
VYDMSNALNHPMEGQLTDGSVTAEAAIPLGADEFQVALVAVLPSAYGYALRLTRNTADAEDLVQDTALRAFRAKSQFEPGTNFKAWVFRILTRCFWANHRRRQRRPNTVDFDDTPDLYLYARSAEHGLPWEGEDPARTLIDRLGTERVAESIGQLPEEYGVVCTLYFMEDFAYHEIADVLEVPVGTVRSRLHRGRKMLQKALWCLAEESGIVTELTQQEGDA*