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S3-18-all-fractions_k255_3768672_8

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 9278..9829

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 184
  • Evalue 5.10e-44
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 182.0
  • Bit_score: 236
  • Evalue 4.20e-60
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG88339.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 182.0
  • Bit_score: 236
  • Evalue 2.10e-59

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
TTGTCAGACCAAGATCTCCTGCGCCGTCTCCGACAGGGGGACCAGACCGCCTTCGACGCGATCTTCCGCACCTGGTACGGCCCCCTCGTGGGGACGGCCGAGCGGATGCTGCGCGACCGGGCGGTGGCGGAGGAGCTCGTCCAGGACGTGATGCTCGAGTTGTGGCGGCGGCGCGAGTCGCTCGCGGCGGAGGGGTCGGCGCAGGCGTACCTGTTTCAGGCCACCCGGAACCGGGTGCTCAATCACCTGCGGCATCTGAAGATCGAGCAGCGGAGCGAGCCCGAGGTCCGCGGGGACAGCACATCGACACCGCAGGCCGACGCGGAGGTCGTGGAGGAAGAGTTGGACGTCGCCGTGCAGCGTGCCGTGCAGTCGCTTCCGGACCGGTGCCGCGAGGTGTTCGAGCTCAGTCGGGTGCACGGGCTCAAGTACGCCGAGATCGCGCGAACGTTAGGCATCTCGGTCAAGACCGTGGAAGCGCAGATGGGCAAGGCCCTCCGGACGTTGCGCGAGCGTCTCGCGCCGTGGCTGCCGGACCGGGAGAGCGGTTAG
PROTEIN sequence
Length: 184
LSDQDLLRRLRQGDQTAFDAIFRTWYGPLVGTAERMLRDRAVAEELVQDVMLELWRRRESLAAEGSAQAYLFQATRNRVLNHLRHLKIEQRSEPEVRGDSTSTPQADAEVVEEELDVAVQRAVQSLPDRCREVFELSRVHGLKYAEIARTLGISVKTVEAQMGKALRTLRERLAPWLPDRESG*