ggKbase home page

S3-18-all-fractions_k255_825878_8

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(9241..9801)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGP7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 182.0
  • Bit_score: 132
  • Evalue 3.00e-28
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein {ECO:0000313|EMBL:EAY30664.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 182.0
  • Bit_score: 132
  • Evalue 4.30e-28
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 181.0
  • Bit_score: 118
  • Evalue 1.30e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microscilla marina → Microscilla → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
GTGGCCGAATCGTCGGACGAAGAACTCATGCTTGCGCTTCGTGATGGCGAGCTCGCGGCGTTCGACTCGCTCTTTCGTCGTCATTACGAGGCGGTTCGTGCGTTGTGCGCGCGCATCTCGGCCAGCGTCACTGCGGGTGACGACCTCGCGCAGGAGACGTTCCTCCGGGTGCTGCGCCATCGCGCGACCTTCCGCGGCGACGCCCGGTTCACGACGTGGGTCTATCGCATCGCGCGCAATGTGTGCCTCGAGCAGATCGCGCGTCAGGCACGTGAGCATCGGCTCGCTGCGCAGTGGAGTGCCGAATCCGTGTCGGCGTCGCAACCCGCTGGTGAAGACGACACCGAGGTGCTCGGCGCGGCAATGCAATCGTTGACGCCGGAGCAGCGTGAGGTGCTCGTGCTCTGTCGCTACCACGACCTGCCTTTCTCGGAGATCGGATCGCTCCTCGGATGTACCCCAGGTGCCGCGCGCGTACGCGCGCATCGGGCGCTGGGTGCCTTACGCGAGGCGTATCACTCGTTGAGTCACAACGAGAGCCGGGGCCGTGGTGCGGGCTGA
PROTEIN sequence
Length: 187
VAESSDEELMLALRDGELAAFDSLFRRHYEAVRALCARISASVTAGDDLAQETFLRVLRHRATFRGDARFTTWVYRIARNVCLEQIARQAREHRLAAQWSAESVSASQPAGEDDTEVLGAAMQSLTPEQREVLVLCRYHDLPFSEIGSLLGCTPGAARVRAHRALGALREAYHSLSHNESRGRGAG*