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S3-18-all-fractions_k255_1276573_39

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(52393..53319)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 301.0
  • Bit_score: 243
  • Evalue 1.60e-61
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 301.0
  • Bit_score: 243
  • Evalue 4.40e-62
RNA polymerase sigma factor {ECO:0000313|EMBL:BAH37752.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 301.0
  • Bit_score: 243
  • Evalue 2.20e-61

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 927
ATGGCAACGACAAAATCCCGAAACGCGTCAAAGCCGCGTCCGGTAGCGATCGCGGATACGACCCCGCCCGACCTTCTCGATCTCTACATCGAGGAGCTGTCGAACGAGCCGGTCGCCACCGCGGAAGCGCAGAAAGCGCTCGCGCGCGTGATGCGTAATACGAAGCTGAGCGCCGAACAGCGCGAAGCCGCGCGGGATGAGCTCATCCGCGCGAACCTTCGCTTCGCCTTCTCGGTTGCGAAGCAGTATCAGAACCGTGGACTTCCCCTCGAAGATCTCGTGGGCGAAGCCAACGGTGGACTCTGTCGCGCAGCAGACAAGTACGACCCCGATGTCGGAGTCAACTTCATCAGCTACGCCGTATGGTGGATTCGCCAGGCAATCTTCTCGGCGATCTCCACGAAGACGCACACCGTGCGCGTGCCCCTCGGGCGCGCGACCGACGTGCGAAAGATCGCGCGCGCGCGCACGGCACTCCGCGAAGTGCTCGAGCGTGAGCCGACGATCGAAGAGCTGGCCCGCGTGGCCGAGCTGCCGCTGGACGTCGTTCGTGAGCTGAGCATCGCGATTCAGCCCGAGCGGTCGCTCGACGAGCCCCTCGGCAACGGCGCCGGTCGCTCGGAAGCGCGAACGCTGGCGAGCATTCTCCCGGCCGAAGCCGACGAGCGTACGGATGTCGATGCACGACTCGAAGATGAGTCGCGTCGCGAGGCGCTGCTCCGTGCACTGAGCCCGCTGCCGCCGCGGGATCGCAAGATCCTGCTGATGTACTACGGGTTGGAAACCGGTGAGCCGATGACCATGGAGCAGATCGCCACGGTGTTCGGCGTCACACGTGAGCGTGTCCGCCAGCTCAGAGACAGGGCTCTGGCCGCTGTCCGGGATGGCGAAGCAGCGAAGGCGCTGCGCCGCGACTGGGCCGCATAA
PROTEIN sequence
Length: 309
MATTKSRNASKPRPVAIADTTPPDLLDLYIEELSNEPVATAEAQKALARVMRNTKLSAEQREAARDELIRANLRFAFSVAKQYQNRGLPLEDLVGEANGGLCRAADKYDPDVGVNFISYAVWWIRQAIFSAISTKTHTVRVPLGRATDVRKIARARTALREVLEREPTIEELARVAELPLDVVRELSIAIQPERSLDEPLGNGAGRSEARTLASILPAEADERTDVDARLEDESRREALLRALSPLPPRDRKILLMYYGLETGEPMTMEQIATVFGVTRERVRQLRDRALAAVRDGEAAKALRRDWAA*