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S3-18-all-fractions_k255_4247296_6

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(8750..9316)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF-like family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC15_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 171.0
  • Bit_score: 200
  • Evalue 9.20e-49
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 221
  • Evalue 1.90e-55
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG88423.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 221
  • Evalue 9.20e-55

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGAATCCATCGACGACAGGCCCAGTCATCGTCGGCGAAGCAGCGTCAGGCGGCGCGCCCGAGTCGGTGCACCAGCTCGTCGCGCTTGCCTATCACGAGCTGCGGGCCATTGCACACGCCCGCCTGGCTGCACGCGGCGGTGGCGGCGGGACGCTCTCGACGACAGCGCTCGTCCACGAGGCGTACCTCAAACTGGTCGGCCAATCGCCGGGCAAGTGGCGCGACCGCTCGCATTTTTTCGCAGTGGCCTCGTTGGCCATGCGCCACGTCATGGTCGACTGCGCGAAGGCGCGCGTCGCGGTAAAGCGGGGAGGAGACCGCCGCCGCATCAGCCTCGATGACGACGAGATCGGCGTCGATGATCAGGCGGATGCACTCCTGCAGCTGGACGACGCTCTCGATCAGCTGGCGGAGGTAGAGCCACGCGTGGCCAGGGTAGTGGAGTACCGGTTCTTCGGCGGTCTGACGGAAGTCGAGATCGCCGACTCGCTCGGTGTAACGGTCCGGACCGTACGGCGCGACTGGCTCAAGGCGCGCGTGATGCTCCGGCGCGTGCTCGAGTCGTAG
PROTEIN sequence
Length: 189
MNPSTTGPVIVGEAASGGAPESVHQLVALAYHELRAIAHARLAARGGGGGTLSTTALVHEAYLKLVGQSPGKWRDRSHFFAVASLAMRHVMVDCAKARVAVKRGGDRRRISLDDDEIGVDDQADALLQLDDALDQLAEVEPRVARVVEYRFFGGLTEVEIADSLGVTVRTVRRDWLKARVMLRRVLES*