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S3-18-all-fractions_k255_4646613_8

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(11080..11631)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG02_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 114
  • Evalue 8.40e-23
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 114
  • Evalue 2.40e-23
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY49491.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 114
  • Evalue 1.20e-22

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Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
TTGCCCTCCGAGCACGACCAGCCGTCCGACGCAACTCTGCTTGCGCGTCTCGCCGCAGACGACTCGTCCGCGCTCGACGCGTTGCTCACGAAGTACTGGTCGCCGCTCACGACGTTCATCGCGCGGATGACGGGCTCGCTCGAGGCGGCCGAGGATGCGGTGCAGGAGACGTTCTGCCGCCTGTGGGAGCGACGGGCGTCGTGGCGCGTCGAGGGGTCGGTGGCTGGTCTGCTCTTCCGCCTCGCGAGAAACATCGCGATCTCGGAGCACCGGCACCTGCAAGCGGAAGAGCGCGCCGCGCAGGTCGCTGGCGATGCGAGCCCCAAGCATCACGCCGCGCCGGAGGTGCCTGACACGGAGCTCCGCGCGCTGCTGGAGCAGGCGATCGCGACGCTGCCGCCGCGACGCCGCGAGGTCTTCCTGCTGCGGGTGGTGCACGATCTCTCGTACAAGGAGATCGCGGCGGTGATGGGCACGTCGCCGCAGACGGTGGCGAATCAACTAAGCCATGCGCTGGCGGCGCTGCGGGAGCGACTAAGAGCTATCAGCTAA
PROTEIN sequence
Length: 184
LPSEHDQPSDATLLARLAADDSSALDALLTKYWSPLTTFIARMTGSLEAAEDAVQETFCRLWERRASWRVEGSVAGLLFRLARNIAISEHRHLQAEERAAQVAGDASPKHHAAPEVPDTELRALLEQAIATLPPRRREVFLLRVVHDLSYKEIAAVMGTSPQTVANQLSHALAALRERLRAIS*