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S3-18-all-fractions_k255_3792471_8

Organism: S3-18-all-fractions_metab_2

partial RP 26 / 55 MC: 5 BSCG 29 / 51 MC: 9 ASCG 11 / 38 MC: 5
Location: comp(5167..5772)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UIZ3_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 199.0
  • Bit_score: 187
  • Evalue 1.10e-44
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 199.0
  • Bit_score: 187
  • Evalue 3.20e-45
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADG75559.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 199.0
  • Bit_score: 187
  • Evalue 1.60e-44

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Taxonomy

Cellulomonas flavigena → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGGAGCGGGCACCGACGACCGAGATCTGGCCACACTGGTCAAGGCCAGCATCGACCGCGACGAGCAGGCCTGGAACGAACTGGTGCGCCGGTTCGCCGGCCTGGTGGCGTACGTGATCCGGCACTACCGGCTGGGCGCGGCCGATGCCCAGGACGTCAGCCAGCTGGTCTGGCTGCGGCTGGTCGAGCACCTCGGCCAGATCCGCGAGCCGTCCGCGCTGCCGGGCTGGCTGGCCACCACCACCCGGCACGAGTGCGAGCGGTACCTGCGGATCAACGGCCGCAGCGTGGCCGTCGACCCGCAGACCCTCCGCGAGGACGACCGCGCCGAAGCGTGGCATATGGACGATCTGCTGCTGGCCGCCGAGCGCCGCCAGGTGCTGCTGGACGGGCTGGCCCAGCTGGCCCCGCCGCACCGCGAGCTGCTGCTGATGCTGGCCGCCGATCCGCCGTACGCGTACGCGGAGATCAGCCGGATCCTCGGCATCCCGATCGGCAGCATCGGGCCGACCCGCAGCCGGGTGCTCGGCAAACTGCGTGACACCGACGCGATCCGGGCCTATCTCGGCGCGGAGGAGCCGGTACAGATGGGAAGGTGTCCGTGA
PROTEIN sequence
Length: 202
MGAGTDDRDLATLVKASIDRDEQAWNELVRRFAGLVAYVIRHYRLGAADAQDVSQLVWLRLVEHLGQIREPSALPGWLATTTRHECERYLRINGRSVAVDPQTLREDDRAEAWHMDDLLLAAERRQVLLDGLAQLAPPHRELLLMLAADPPYAYAEISRILGIPIGSIGPTRSRVLGKLRDTDAIRAYLGAEEPVQMGRCP*