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S3-18-all-fractions_k255_2119404_4

Organism: S3-18-all-fractions_metab_2

partial RP 26 / 55 MC: 5 BSCG 29 / 51 MC: 9 ASCG 11 / 38 MC: 5
Location: comp(3350..4603)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Salinispora RepID=UPI00035D777B similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 405.0
  • Bit_score: 678
  • Evalue 3.30e-192
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 405.0
  • Bit_score: 672
  • Evalue 6.80e-191
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADL49456.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 405.0
  • Bit_score: 667
  • Evalue 8.30e-189

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Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGACCGAGGTCGACGAGGCGATCGCCCGGGTCCACCGCGATGAGTGGGCACGGCTGGTCGCGACCCTGGCCCGGCGCTTCGGGGACCTCGACATCGCCGAGGAGATGGCCGCCGAGGCGTTCGCGGCCGCCGTCGAGCGCTGGCCGGGCGACGGCGTACCCCCGAATCCCGCCGCCTGGCTCACCACCACCGCGCACCGCAAGGCCATCGACCGGCTCCGCCGCGAGGCCAGGCGCGCGGAGAAACACCGGGAGGCGCTGATGCTGTCCGGTACCCCCGAGCCGATCGGCGTCATCGACGACGACCGGCTGCGCCTGATGTTCACCTGCTGTCACCCGGCGCTGGCCATGGAGGGGCGGGTGGCGCTGACCCTGCGGATGGTCGGCGGGCTCACCGTGCCGGAGATCGCCCGCGCCTTCCTGGTCCAGGAGACCGCCATGGGCCAGCGGATCACCCGCGCGAAGGCGAAGATCAAGGCGGCCGGGATCCCCTATCGCGTGCCGTCACGGGACGACCTGCCGGCCCGCGTCACCGGCGTGCTCGCCGTCCTCTTCCTGATCTTCAACGAGGGCTACCTGGCGTCGGACCCGGAGAAGGAGGCGGTCCGCAGCGACCTGACCGCCGAGGCGATCCGGCTGACCCGGCTGGTCCGCGACCTGATGCCGGCCGACGGCGAGGTCGCCGGGCTGCTGGCGCTGATGCTGCTGACCGAGGCGCGCCGGCCCGCGCGGGTGTCGGCCGGCGGTGACCTGGTGACCCTCGACGAGCAGGACCGCGGCGCCTGGGACCGCGAGCTGATCGTCGAGGGCCACGCGCTGGTCCGCGAGCGCCTCGCCGCCGGCCAGGCGCCGGGGCGCTATCAGATCCTGGCCGCGATCAACGCCGTGCACACCGACGCCCGCGACGTCCGCGACACCGACTGGTCGCAGGTCGTCGCGCTCTACGACCAGCTGGTCCGGCTCGACCCTTCGCCGATCGTGCGGCTCAACCGGGCGATCGCGGTCGCCGAGCTGGACGGCCCGGAGGTCGCGCTGACCGAGGTCGACGGTCTGCCGCTGGAGGGCTACCACCTCTTCCACGCCACCCGCGCCGACCTGCTGCGCCGGCTGGGCCGCGGCGACGAGTCACGGGCGGCGTACGACCGGGCCATCGCGCTGGCCGGCAACACCGCCGAGACGGCGTACCTGATCCGTCGCCGCGACCAGCTGGCCGGCCCTGAAGCCACCTCGGCGGCAAATGATCACGCGACCTGA
PROTEIN sequence
Length: 418
MTEVDEAIARVHRDEWARLVATLARRFGDLDIAEEMAAEAFAAAVERWPGDGVPPNPAAWLTTTAHRKAIDRLRREARRAEKHREALMLSGTPEPIGVIDDDRLRLMFTCCHPALAMEGRVALTLRMVGGLTVPEIARAFLVQETAMGQRITRAKAKIKAAGIPYRVPSRDDLPARVTGVLAVLFLIFNEGYLASDPEKEAVRSDLTAEAIRLTRLVRDLMPADGEVAGLLALMLLTEARRPARVSAGGDLVTLDEQDRGAWDRELIVEGHALVRERLAAGQAPGRYQILAAINAVHTDARDVRDTDWSQVVALYDQLVRLDPSPIVRLNRAIAVAELDGPEVALTEVDGLPLEGYHLFHATRADLLRRLGRGDESRAAYDRAIALAGNTAETAYLIRRRDQLAGPEATSAANDHAT*