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S3-18-all-fractions_k255_3560238_11

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 9138..9713

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 192.0
  • Bit_score: 119
  • Evalue 5.00e-24
hypothetical protein n=1 Tax=Nocardiopsis xinjiangensis RepID=UPI00034DFBAF similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 194.0
  • Bit_score: 122
  • Evalue 3.20e-25
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 192.0
  • Bit_score: 119
  • Evalue 1.00e-24

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Taxonomy

Thermovirga lienii → Thermovirga → Synergistales → Synergistia → Synergistetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGACTGTTCGTCGCCCTGGAAATCCCCGACGCTGTGCGCCGCGAGGTGGCGCGCCGGGTCGCCGGTCTGCGCGAAAGGCTGCCGCGCGCGAAATGGGTCGACACCGCGAATCTGCACCTAACCCTCCTGTTTCTGGGCCAGGTGGACGAGGCCCAGGTGCCCGTCCTGACCTCGGCTCTTGAGGAGGCCTTCGCCAGGCATCCGCCCCTCGATCTGCGCCTCGCCGACGCCGGGACCTTCCCGCCGCGCCGGCCCGCCCGGGTCGCCTGGGTGGGGATGGAGAGCCCCGGCGATCTGGAAGGCCTCCAGACCGACGTGACGGCCGCGGCCGTGGAGGCGATCGGCTTCGAGCCCGAGGAGCGGCCGTACCATCCGCACGTGACCCTGGCGCGCTGCGAGCCCAACTGGCCGCGCGACGCCGCGGACAAGTTCGTGACCGCCTTCCCGGGGACCATCGGCCAGCCGTGGATCGCCGAACGGGGCGTCCTCATGGAAAGCAAGCTGAGCCCGCGCGGCGCGCAGTACCGCGTCGCGGCCGAGCTGCCGCTCGCAGGAGCGGAGGAGGACGAGTGA
PROTEIN sequence
Length: 192
MRLFVALEIPDAVRREVARRVAGLRERLPRAKWVDTANLHLTLLFLGQVDEAQVPVLTSALEEAFARHPPLDLRLADAGTFPPRRPARVAWVGMESPGDLEGLQTDVTAAAVEAIGFEPEERPYHPHVTLARCEPNWPRDAADKFVTAFPGTIGQPWIAERGVLMESKLSPRGAQYRVAAELPLAGAEEDE*