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S3-18-all-fractions_k255_261428_3

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(2440..3378)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RZ83_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 327.0
  • Bit_score: 144
  • Evalue 1.70e-31
RNA polymerase sigma factor {ECO:0000313|EMBL:AKF79114.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 314.0
  • Bit_score: 145
  • Evalue 1.10e-31
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 310.0
  • Bit_score: 137
  • Evalue 5.90e-30

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Taxonomy

Myxococcus fulvus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGATCCCGAGCCATACCACCATCGTGCTGTCTGCCGTGGAGCGCTGCCGGAAGCGCCTCTGGGCGCATTGCTACCGGATGACGGGGCGCCGCACAGAGGCGGACGATCTCAGCCAGGAGGCGATCGCGCGGGCCATCGAGCGCGCCGATGAGTTGCACGACCCCGCGGCCGTCGAGGGCTGGCTCTTCCGGATCGCGACCACCGTCTGCCTCGACCACTTCCGGCGGGCGCGGCGGACGCGCGAGCTGACGGAGCTCGTCGACCCTGTTGCATCCGACGACCTCGTCGAGGCGCCGGCCGGCCCGCCCGCCAGCCCGGAAACGGCGCTGCTCCAGCGGGAAGAGGTCCGCCTGGCGCTCCTCGTCGCTCTGCAGAGCCTGCCGCCGAAGCAGCGCGCCGTGCTGCTGCTGCACGACGTCTGCGACCTGCCGCTCGCCGAGGCCGCGGCCGCCACCGGCACGAACGCCAACGCCGCCAAGGCGACCTTGCATCGTGCCCGTGCGGGGCTCGCGCGGACGCGAGGCCGCGCCGACGTCGACGCGCGGGCCGATGCGGACGTGGTCGAGCGCCTCGCCCGGGCGCTCGAGGAGCGCTCCGTCGATGCGCTGGCTCTGCTCCTCGCCGATGACGTCTGGGGCGTCGTCGACGGCGGAGGGGTCGTGCGGGTCGCCTCGCGGCCGACGGTCGGCGCACGGGCTCTCCTGCGCCGCTTCGCCGGCCTCAGCCAGCGGGTCGCCGCGCCGGTCGCCTGTCGCGTCGTGCGCCTGAATCGCGAGCCCGCCGTCCTCGTCACGCTGCCCACCGCCGCGAACGCAGTGTTCGCTTCCGTTCACGTCGAGACGCGGAATGGGCGCATCGCCGCCATGCGGGTGGTGCGCGATCCCGCGAAGCTCGCGCCCCTCAGGGGGCTCGCTGCACCGATCGGAGCCACGCCATGA
PROTEIN sequence
Length: 313
MIPSHTTIVLSAVERCRKRLWAHCYRMTGRRTEADDLSQEAIARAIERADELHDPAAVEGWLFRIATTVCLDHFRRARRTRELTELVDPVASDDLVEAPAGPPASPETALLQREEVRLALLVALQSLPPKQRAVLLLHDVCDLPLAEAAAATGTNANAAKATLHRARAGLARTRGRADVDARADADVVERLARALEERSVDALALLLADDVWGVVDGGGVVRVASRPTVGARALLRRFAGLSQRVAAPVACRVVRLNREPAVLVTLPTAANAVFASVHVETRNGRIAAMRVVRDPAKLAPLRGLAAPIGATP*