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S3-18-all-fractions_k255_3913239_19

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(15159..15698)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2B8_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 179
  • Evalue 2.70e-42
Cold-shock protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 179
  • Evalue 7.70e-43
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:ADE14777.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 179
  • Evalue 3.80e-42

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Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCAGGTTCCCCTGGAAATTTCGACGCGGCGGATCGACCTTTCACCGGATCTCGAAGCCGATCTGCGGCGGAGAGCCGACCGGCTCAACCGCCTGTACGATCGGATGACGAGCTGCCGGATCGCCGTGGAGCGGCCGAGCTTTCACCACAACGAGGGAGGCCCCTACCGCGTGCGGATCGACATCACCGTCCCCGGCAGCGAGCTGGTGGCCGACAAACAGGCCGAGGACCTGAACACGGCCATCCGCGACGCCTTCCAGGCGGCCGAGCGCCAGGTTGACGAGTTCTCGCAGCGCCGCCGCGGCGAAGTGAAGACCCAGGTTGGCCCACCCGAGGGACCGGTCATCCGGCTCTTCAAGGAGGATGGGTTCGGCTTCCTGCAAGCTCCGGACGGCGCCGAGGTCTACTTCCACCGCAACGCCGTGATCGAGCCCGGCTTCGACGATCTGGAGGTCGGAATGCGGGTCCGTTACGCCGAGACGCAGGGGATCGAAGGTCCGCAGGCGAGCACCGTGTCGCTCGTGGGGAAGGGAGGCTGA
PROTEIN sequence
Length: 180
MQVPLEISTRRIDLSPDLEADLRRRADRLNRLYDRMTSCRIAVERPSFHHNEGGPYRVRIDITVPGSELVADKQAEDLNTAIRDAFQAAERQVDEFSQRRRGEVKTQVGPPEGPVIRLFKEDGFGFLQAPDGAEVYFHRNAVIEPGFDDLEVGMRVRYAETQGIEGPQASTVSLVGKGG*