ggKbase home page

S3-18-all-fractions_k255_1776239_22

Organism: S3-18-all-fractions_metab_conc_57

near complete RP 45 / 55 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(18475..19098)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQC2_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 144
  • Evalue 6.60e-32
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 144
  • Evalue 1.90e-32
Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 175.0
  • Bit_score: 246
  • Evalue 3.00e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 624
GTGCCTACCGCTTACTATTCCTATACTCTTTGCAACCGTCAGGCGGACTCCCGCATCCTTAACAGCACCATGGCCCGGACCCTTTTGATGGACTCTTCGCTGCTCGCCAACGCCGAAACGGTTGTCTCCCGCGCTCGCGCTGGGGATACGGAGGCGTTGGGGGAGCTGTTCCGGGCCTTCGAGGTGCCGGTCTATAACCTGGCCCGCCGGATCTGCCGCACCACCGAGGACGCGGAGGACGTGCTTCAGGAGACGTTCTTTGAGGTCTGCCGGAGCATCAAGCGATACCGGGAGGAGGGAAGCCTGTGGGGTTGGATCCGCACCATCGCCGCCAGCAAGGCGCTGATGCGTCTCAGGCGGAACAAGTACCGGGACACCGAGGAGCTGCACGATGAGGTCGTCGGTAACCGGCGGGAGGACACCCCCCTCCGCATGGACCTCGAGGCAGCCCTTGAGCGGCTCTCCGAGACATCCCGGGCGGTAGTCTGGCTCCACGATGTCGAAGGCTACACCCACGAAGAAATCGCTGAGATGATGGGCAAGACTCCGAGCTTCTCGAAGTCGCAGCTGTCGCGGGCGCACGCTAGACTGCGTTCATGGCTCGGGGAGGAGATGATTCCATGA
PROTEIN sequence
Length: 208
VPTAYYSYTLCNRQADSRILNSTMARTLLMDSSLLANAETVVSRARAGDTEALGELFRAFEVPVYNLARRICRTTEDAEDVLQETFFEVCRSIKRYREEGSLWGWIRTIAASKALMRLRRNKYRDTEELHDEVVGNRREDTPLRMDLEAALERLSETSRAVVWLHDVEGYTHEEIAEMMGKTPSFSKSQLSRAHARLRSWLGEEMIP*