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S3-18-all-fractions_k255_1959384_3

Organism: S3-18-all-fractions_metab_conc_57

near complete RP 45 / 55 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(1358..1933)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJH6_MYXFH similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 175.0
  • Bit_score: 194
  • Evalue 6.70e-47
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EYF03307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 187.0
  • Bit_score: 218
  • Evalue 7.90e-54
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 175.0
  • Bit_score: 194
  • Evalue 1.90e-47

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGAGTAGGTCCGGAACTGAAGCCGCTGAACGAGACCCGCAGACACCCGAGGTGCTGCGGGTTCTCACGGCGAACCACTCCAGGTTCCTGGATTTCGTGGAGCGCCGGGTAGGATCTCGCGACGCCGCCGAAGACATTCTTCAGGAAGCTTTCGTTCGCAGTCTCAGCCATAGTCCACCGGACAGCTCCGCCTCGGCCACCGCGTGGTTCTACCGGGTTCTACGCAACGCGATCACAGATTATTACCGGCGGCAAGGAACACGGGGGCGAGCCCTGGACAGCTATGCGGTTGAAGCCGGGAACGCCTCTGAGAACGTGGATGAGGACCTGGAGTCGGTTGTCTGCGCCTGTGTCACCGACCTCGTGGACACCCTCAAGGAAGAATATGCTACGGCGCTCCGCCGCGTGGACCTGGACGGTATAAGCGTTCGGCAGTTTGCCGTCGAGACGGGGATTACGCCCAGTAATGCCGGAGTTCGTCTGCACCGTGCCAGAGAGGCTCTTCGGCGGCAGCTCGCCCGGAGCTGCGGCACGTGTCTGACCCACGGCTGCTTCGATTGTCAGTGTCAGAACTGA
PROTEIN sequence
Length: 192
VSRSGTEAAERDPQTPEVLRVLTANHSRFLDFVERRVGSRDAAEDILQEAFVRSLSHSPPDSSASATAWFYRVLRNAITDYYRRQGTRGRALDSYAVEAGNASENVDEDLESVVCACVTDLVDTLKEEYATALRRVDLDGISVRQFAVETGITPSNAGVRLHRAREALRRQLARSCGTCLTHGCFDCQCQN*