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S3-18-all-fractions_k255_5552851_11

Organism: S3-18-all-fractions_metab_conc_57

near complete RP 45 / 55 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(10013..10903)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 294.0
  • Bit_score: 312
  • Evalue 4.50e-82
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 294.0
  • Bit_score: 312
  • Evalue 1.30e-82
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 292.0
  • Bit_score: 325
  • Evalue 5.50e-86

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 891
GTGGCAGGCACGCAGACGAAGCGTCGGCGCGGTTCCAAGCCGGCGACCATGGCAAAAGCCTCCGATGAAGGACGCGAGAGCCTGGACTTCTACCTGAAAGACATCAGCCGCATCCCCCTGCTAACTGTGCCGGAGGAGACGGCCCTGGCGCGGCGCGCCATCAAGGGCGATATCGAGGCCCAGGAAAAGCTTGCGCGCCATAATGTGCGCTTTGTGGTGTCAGTGGCAAAGAAGTTCCAGAATCGGGGCGTCCCGCTCATGGATCTCATCGGCGAGGGCAACGTTGGCCTGATGACGGCCGCGCGTAAGTTCGATCCCGACCGGGGCGTGAAGTTCATTTCCTACGCCGTGTGGTGGATCCGCCAGGCTATCCAGGCGGCGATCGCTCGGCATGGGCGTCCAGTGCGGCTTCCACTCAATCGGACCGCGGACCTCAGCCGCCTGGGCCGGGTCACCACGCTATTGACGGAGCAGCTCGGACGGGTTCCTACGACCGAGGAGCTGGTCAAGGCGACTGGTCTGACGCCGGAGGCGGTGCGGTCCCTGGGTGCTCTCCACGTAGAGGCCTTGAGGCTCGACCAGCCTCTCAGGGAGGGTGAGGATCGGGGTCGGCTGGATCGCTTTGTCCCGCTGACTCAGGAAGGTACGGATGCTTCGACTCTGGCGAGTAGCCGTACCAGCGACCTGGAGAACGCGCTTGCCGCTCTTCCCCCAAGGGACGCGAAGGTGCTCCGGCTGTACTTCGGGCTGGACGACGGTAACAGTCGTACTTTGGAGGAGATCGGCAGGATGATGGGTGTGACTCGCGAGCGTATCCGCCAGCTGCGCGATCGTGCACTCCGTCAGCTCAAAGAAGAGCACGGCGACAAGCTACGCGAGCTGGCAGCGTAG
PROTEIN sequence
Length: 297
VAGTQTKRRRGSKPATMAKASDEGRESLDFYLKDISRIPLLTVPEETALARRAIKGDIEAQEKLARHNVRFVVSVAKKFQNRGVPLMDLIGEGNVGLMTAARKFDPDRGVKFISYAVWWIRQAIQAAIARHGRPVRLPLNRTADLSRLGRVTTLLTEQLGRVPTTEELVKATGLTPEAVRSLGALHVEALRLDQPLREGEDRGRLDRFVPLTQEGTDASTLASSRTSDLENALAALPPRDAKVLRLYFGLDDGNSRTLEEIGRMMGVTRERIRQLRDRALRQLKEEHGDKLRELAA*