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04302015_12_scaffold_4885

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_4885_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

04302015_12_scaffold_4885_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149..514)
DNA (366bp) protein (122aa)
bifunctional 6-pyruvoyl tetrahydropterin synthase/hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VI54_CAUST
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
04302015_12_scaffold_4885_3
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(536..934)
DNA (399bp) protein (133aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
dihydroneopterin aldolase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BA5
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
04302015_12_scaffold_4885_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(931..1719)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00038132DE
Short-chain dehydrogenase {ECO:0000313|EMBL:AIT06431.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
short-chain dehydrogenase/reductase SDR
04302015_12_scaffold_4885_5
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1763..2509)
DNA (747bp) protein (249aa)
Nuclease (SNase domain protein) n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EB63_METSZ
Nuclease (SNase domain protein) {ECO:0000313|EMBL:CCD32219.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocysti
HLA8; high light-induced nuclease
04302015_12_scaffold_4885_6
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2599..3627
DNA (1029bp) protein (343aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
adenylosuccinate synthetase n=1 Tax=Hirschia maritima RepID=UPI00037FE5C9
04302015_12_scaffold_4885_7
unknown

Not on your lists

3718..4173
DNA (456bp) protein (152aa)

This feature has no annotations

04302015_12_scaffold_4885_8
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4189..5745)
DNA (1557bp) protein (519aa)
Sodium:alanine symporter n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZH06_9CAUL rbh
Sodium:alanine symporter {ECO:0000313|EMBL:GAD60397.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas
hypothetical protein; K03310 alanine or glycine:cation symporter, AGCS family
04302015_12_scaffold_4885_9
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5852..6634)
DNA (783bp) protein (261aa)
glucose dehydrogenase; K05889 polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6]
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B35EB0
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
04302015_12_scaffold_4885_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6631..7818)
DNA (1188bp) protein (396aa)
glucose dehydrogenase; K05889 polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6]
Glucose dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBL1_PHEZH
Glucose dehydrogenase {ECO:0000313|EMBL:ACG76471.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacteriu
04302015_12_scaffold_4885_11
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7918..8898)
DNA (981bp) protein (327aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhod
dTDP-glucose 4,6-dehydratase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXU3_ACICJ
04302015_12_scaffold_4885_12
unknown

Not on your lists

comp(8968..9468)
DNA (501bp) protein (167aa)

This feature has no annotations

04302015_12_scaffold_4885_13
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9444..10172)
DNA (729bp) protein (243aa)
RNA methyltransferase, TrmH family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C5D5_HYPNA
RNA methyltransferase {ECO:0000313|EMBL:KDA04460.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis
RNA methyltransferase
04302015_12_scaffold_4885_14
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10169..10330)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FJ11_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KCZ91156.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannasch
hypothetical protein
04302015_12_scaffold_4885_15
unknown

Not on your lists

comp(10468..10644)
DNA (177bp) protein (59aa)

This feature has no annotations

04302015_12_scaffold_4885_16
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10641..11492)
DNA (852bp) protein (284aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000255|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=DAPD_METNO
04302015_12_scaffold_4885_17
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11588..12250)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XQ51_HIRBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58568.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
Displaying 17 items

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