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04302015_12_scaffold_47

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Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_47_1
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203..775
DNA (573bp) protein (191aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDG9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX64603.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
04302015_12_scaffold_47_2
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

923..2242
DNA (1320bp) protein (440aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
histidinol dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F4F0E6
04302015_12_scaffold_47_3
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2557..4221
DNA (1665bp) protein (555aa)
Heavy metal translocating P-type ATPase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJN9_9SPHN
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHJ58473.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
heavy metal translocating p-type atpase
04302015_12_scaffold_47_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4632..6557
DNA (1926bp) protein (642aa)
High-affinity Fe2+/Pb2+ permease (Fragment) n=2 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSQ9_9BRAD
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15829.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
high-affinity iron transporter; K07243 high-affinity iron transporter
04302015_12_scaffold_47_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6622..6897
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L2K6_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:KGB59346.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
hypothetical protein
04302015_12_scaffold_47_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7121..7681)
DNA (561bp) protein (187aa)
DNA invertase n=2 Tax=Sphingobium RepID=T0GA60_9SPHN
DNA invertase {ECO:0000313|EMBL:EZP66720.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis
resolvase
04302015_12_scaffold_47_7
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7854..10823
DNA (2970bp) protein (990aa)
TnpA transposase n=2 Tax=Proteobacteria RepID=M2U1V6_9PROT rbh
TnpA transposase {ECO:0000313|EMBL:EMD81793.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
Tn3 family transposase for insertion sequence element
04302015_12_scaffold_47_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10914..13157
DNA (2244bp) protein (748aa)
Heavy metal translocating P-type ATPase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7D5_9SPHN
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AGH50424.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
04302015_12_scaffold_47_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13174..13569
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6N9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48821.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
04302015_12_scaffold_47_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13729..14100)
DNA (372bp) protein (124aa)
Putative copper efflux system periplasmic protein CusF n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBN7_9SPHN
Putative copper efflux system periplasmic protein CusF {ECO:0000313|EMBL:ENY80886.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingo
putative copper efflux system periplasmic protein CusF
04302015_12_scaffold_47_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14097..17228)
DNA (3132bp) protein (1044aa)
Cation efflux system protein CusA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A4M0_9SPHN rbh
Cation efflux system protein CusA {ECO:0000313|EMBL:GAD49698.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA rbh
04302015_12_scaffold_47_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17225..18457)
DNA (1233bp) protein (411aa)
Cation efflux system protein CusB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZWE2_9SPHN rbh
Cation efflux system protein CusB {ECO:0000313|EMBL:GAD49699.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
cusB; copper efflux system membrane protein CusB; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
04302015_12_scaffold_47_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18454..19686)
DNA (1233bp) protein (411aa)
Putative cation efflux protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLY9_9SPHN rbh
Putative cation efflux protein {ECO:0000313|EMBL:GAD49700.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
CzcC family heavy metal RND efflux outer membrane protein rbh
04302015_12_scaffold_47_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20039..20401)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMI5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49702.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
04302015_12_scaffold_47_15
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21323..22642
DNA (1320bp) protein (440aa)
glycosidase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC080 rbh
Glycosidase {ECO:0000313|EMBL:ETI65122.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
glycosidase PH1107-like protein
04302015_12_scaffold_47_16
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22812..24404)
DNA (1593bp) protein (531aa)
67 kDa myosin-cross-reactive antigen family protein n=1 Tax=Zymomonas mobilis subsp. pomaceae (strain ATCC 29192 / JCM 10191 / NBRC 13757 / NCIMB 11200 / NRRL B-4491) RepID=F8ETF0_ZYMMT rbh
67 kDa myosin-cross-reactive antigen family protein; K10254 myosin-crossreactive antigen rbh
67 kDa myosin-cross-reactive antigen family protein {ECO:0000313|EMBL:AEI37975.1}; TaxID=579138 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;
04302015_12_scaffold_47_17
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24461..25333)
DNA (873bp) protein (291aa)
H+transporting two-sector ATPase subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
UPI0003D5B687 related cluster n=1 Tax=unknown RepID=UPI0003D5B687
ATP synthase F1 subunit gamma {ECO:0000313|EMBL:ETI65511.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
04302015_12_scaffold_47_18
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25330..26847)
DNA (1518bp) protein (506aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] rbh
UPI0003D66000 related cluster n=1 Tax=unknown RepID=UPI0003D66000 rbh
04302015_12_scaffold_47_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26831..27583)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036AD619
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
atpA; F-type H+-transporting ATPase alpha chain
04302015_12_scaffold_47_20
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27593..27835)
DNA (243bp) protein (81aa)
F0F1 ATP synthase subunit C {ECO:0000313|EMBL:ETI65508.1}; EC=3.6.3.14 {ECO:0000313|EMBL:ETI65508.1};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
atpE; F-type H+-transporting ATPase c chain; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
F0F1 ATP synthase subunit C n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC456
04302015_12_scaffold_47_21
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27832..28521)
DNA (690bp) protein (230aa)
F0F1 ATP synthase subunit A n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC455 rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
F0F1 ATP synthase subunit A
04302015_12_scaffold_47_22
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28518..28784)
DNA (267bp) protein (89aa)
UPI0003D5A5B7 related cluster n=1 Tax=unknown RepID=UPI0003D5A5B7
Uncharacterized protein {ECO:0000313|EMBL:ETI65528.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
04302015_12_scaffold_47_23
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28781..29068)
DNA (288bp) protein (96aa)
F0F1 ATPase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC453
F0F1 ATPase {ECO:0000313|EMBL:ETI65506.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
F0F1-ATPase subunit; K02116 ATP synthase protein I
04302015_12_scaffold_47_24
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29065..29484)
DNA (420bp) protein (140aa)
F0F1 ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
F0F1 ATP synthase subunit epsilon n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC452
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
04302015_12_scaffold_47_25
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29481..30929)
DNA (1449bp) protein (483aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta n=1 Tax=Sphingobium baderi LL03 RepID=T0GJ22_9SPHN rbh
04302015_12_scaffold_47_26
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30963..33386)
DNA (2424bp) protein (808aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C3A rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:ETI65127.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
group 1 glycosyl transferase
04302015_12_scaffold_47_27
unknown

Not on your lists

comp(33656..33940)
DNA (285bp) protein (95aa)

This feature has no annotations

04302015_12_scaffold_47_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34499..35062)
DNA (564bp) protein (188aa)
Transposase, fusion orf777 and orf780 n=1 Tax=Sphingomonas aromaticivorans RepID=O85929_SPHAR rbh
transposase rbh
Transposase, fusion orf777 and orf780 {ECO:0000313|EMBL:AAD03946.1}; TaxID=48935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
04302015_12_scaffold_47_29
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35059..35445)
DNA (387bp) protein (129aa)
Transposase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L515_9SPHN
Scaffold25, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30441.1}; Scaffold28, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30246.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alpha
ISSpo6, transposase orf A
04302015_12_scaffold_47_30
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35488..36420)
DNA (933bp) protein (311aa)
copper resistance protein CopD n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003818F9D
Copper resistance protein CopD {ECO:0000313|EMBL:KEZ15193.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
copper resistance D; K07245 putative copper resistance protein D
Displaying items 1-30 of 64 in total

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