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04302015_12_scaffold_119

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Displaying items 1-30 of 111 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_119_1
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(209..973)
DNA (765bp) protein (255aa)
Lipolytic protein G-D-S-L family n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PCM2_9PORP
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CCZ06687.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" so
G-D-S-L family lipolytic protein
04302015_12_scaffold_119_2
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1264..2172
DNA (909bp) protein (303aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XMG2_HIRBI rbh
04302015_12_scaffold_119_3
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2160..3083
DNA (924bp) protein (308aa)
Cell division protein FtsQ n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=FTSQ_HIRBI
cell division protein FtsQ; K03589 cell division protein FtsQ
Cell division protein FtsQ {ECO:0000255|HAMAP-Rule:MF_00911}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltic
04302015_12_scaffold_119_4
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3089..4384
DNA (1296bp) protein (432aa)
Cell division protein ftsA n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XMG4_HIRBI rbh
cell division protein FtsA; K03590 cell division protein FtsA rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica
04302015_12_scaffold_119_5
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4490..5947
DNA (1458bp) protein (486aa)
Cell division protein FtsZ n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XMG5_HIRBI rbh
cell division protein FtsZ; K03531 cell division protein FtsZ rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirs
04302015_12_scaffold_119_6
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6042..6347)
DNA (306bp) protein (102aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SMZ0_PSEME
hypothetical protein; K09956 hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
04302015_12_scaffold_119_7
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6347..6955)
DNA (609bp) protein (203aa)
PadR-like family transcriptional regulator n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XXT4_9RHIZ
PadR-like family transcriptional regulator {ECO:0000313|EMBL:EMS39426.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sou
PadR family transcriptional regulator
04302015_12_scaffold_119_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7037..7993)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000377668C
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58826.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
04302015_12_scaffold_119_9
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8084..8953
DNA (870bp) protein (290aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] rbh
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-0-acyl N-acetylglucosamine deacetylase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XMG6_HIRBI rbh
04302015_12_scaffold_119_10
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9042..10028
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B2E217
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58511.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
04302015_12_scaffold_119_11
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10205..11047
DNA (843bp) protein (281aa)
ComL family lipoprotein n=1 Tax=Hirschia maritima RepID=UPI00037C3D58
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae;
04302015_12_scaffold_119_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11126..11737)
DNA (612bp) protein (204aa)
thioredoxin peroxidase (EC:1.11.1.15)
peroxiredoxin n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039DC9C6
Bacterioferritin comigratory protein, putative {ECO:0000313|EMBL:AAK23651.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sou
04302015_12_scaffold_119_13
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11911..13605
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036810CF rbh
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
04302015_12_scaffold_119_14
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13626..16049
DNA (2424bp) protein (808aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Hirschia maritima RepID=UPI00036AC42A
04302015_12_scaffold_119_15
unknown

Not on your lists

16049..16627
DNA (579bp) protein (193aa)
putative exonuclease, RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
04302015_12_scaffold_119_16
Hyphomonas neptunium, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16869..17474)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4J8_HYPNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI77205.1}; TaxID=228405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas neptunium
04302015_12_scaffold_119_17
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17477..18280)
DNA (804bp) protein (268aa)
ubiG; ubiquinone biosynthesis O-methyltransferase (EC:2.1.1.-); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4J7_HYPNA rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO
04302015_12_scaffold_119_18
unknown

Not on your lists

18364..18777
DNA (414bp) protein (138aa)

This feature has no annotations

04302015_12_scaffold_119_19
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18866..20116
DNA (1251bp) protein (417aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyph
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
aspartate kinase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B75605 rbh
04302015_12_scaffold_119_20
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20118..21632)
DNA (1515bp) protein (505aa)
Pectinesterase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QM39_BRESC rbh
pectinesterase rbh
Pectinesterase {ECO:0000313|EMBL:ADL01965.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevun
04302015_12_scaffold_119_21
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21871..24162
DNA (2292bp) protein (764aa)
protein PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] rbh
PTSINtr with GAF domain, PtsP n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XPY3_HIRBI rbh
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:ACT58500.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica
04302015_12_scaffold_119_22
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24272..25471
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XPY4_HIRBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58501.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (stra
04302015_12_scaffold_119_23
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25578..26738
DNA (1161bp) protein (387aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Caulobacter sp. AP07 RepID=J3ADJ5_9CAUL
04302015_12_scaffold_119_24
unknown

Not on your lists

26839..27456
DNA (618bp) protein (206aa)

This feature has no annotations

04302015_12_scaffold_119_25
unknown

Not on your lists

comp(27495..27917)
DNA (423bp) protein (141aa)

This feature has no annotations

04302015_12_scaffold_119_26
unknown

Not on your lists

28085..28438
DNA (354bp) protein (118aa)

This feature has no annotations

04302015_12_scaffold_119_27
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28515..29048)
DNA (534bp) protein (178aa)
Ubiquinone biosynthesis protein COQ7; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-]
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rul
Ubiquinone biosynthesis protein COQ7 n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XLU2_HIRBI
04302015_12_scaffold_119_28
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29045..29599)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2S3_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72324.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
04302015_12_scaffold_119_29
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29790..30437
DNA (648bp) protein (216aa)
DedA family protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A699_CAUCR
membrane-associated alkaline phosphatase
DedA family protein {ECO:0000313|EMBL:AAK24166.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus
04302015_12_scaffold_119_trna_1
unknown

Not on your lists

30801..30884
DNA (84bp)
transferRNA
Displaying items 1-30 of 111 in total

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