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04302015_12_scaffold_148

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Displaying items 1-30 of 73 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_148_1
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2549)
DNA (2547bp) protein (849aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ACT59925.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ACT59925.1};; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XML1_HIRBI
04302015_12_scaffold_148_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2814..3725)
DNA (912bp) protein (304aa)
sucD; succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCF2_AGRRK
04302015_12_scaffold_148_3
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3793..4998)
DNA (1206bp) protein (402aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=SUCC_HYPNA rbh
04302015_12_scaffold_148_4
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5117..6403)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B6C073 rbh
Major facilitator family transporter {ECO:0000313|EMBL:KCZ88954.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphom
major facilitator family transporter rbh
04302015_12_scaffold_148_5
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6499..7962)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00036082AE rbh
Tat twin-arginine translocation pathway signal sequence domain protein {ECO:0000313|EMBL:EGF91172.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobactera
carotenoid oxygenase rbh
04302015_12_scaffold_148_6
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7989..8456)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QPB5_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EGF91173.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticca
hypothetical protein
04302015_12_scaffold_148_7
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8621..9469
DNA (849bp) protein (283aa)
LytTr DNA-binding domain protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QKE3_9CAUL
LytTr DNA-binding domain-containing protein {ECO:0000313|EMBL:KDA04481.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source=
LytTr DNA-binding domain-containing protein
04302015_12_scaffold_148_8
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9466..9768)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B74D00
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL46914.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC
04302015_12_scaffold_148_9
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9781..11073)
DNA (1293bp) protein (431aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XML4_HIRBI rbh
TRAP transporter solute receptor, TAXI family rbh
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:ACT59928.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="
04302015_12_scaffold_148_10
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11177..12124)
DNA (948bp) protein (316aa)
acyltransferase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B35976 rbh
Acyltransferase domain-containing protein {ECO:0000313|EMBL:KDA04451.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="H
acyltransferase domain-containing protein
04302015_12_scaffold_148_11
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12302..12739
DNA (438bp) protein (146aa)
Response regulator receiver protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XMM3_HIRBI
response regulator receiver
Response regulator receiver protein {ECO:0000313|EMBL:ACT59937.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia b
04302015_12_scaffold_148_12
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12796..13911
DNA (1116bp) protein (372aa)
AFG1-family ATPase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XMM2_HIRBI
AFG1 family ATPase {ECO:0000313|EMBL:KCZ89982.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS
AFG1 family ATPase; K06916
04302015_12_scaffold_148_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13912..14739)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003741A86
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39686.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
04302015_12_scaffold_148_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14963..15427)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FMJ0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AHG93402.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
04302015_12_scaffold_148_15
unknown

Not on your lists

15561..16076
DNA (516bp) protein (172aa)

This feature has no annotations

04302015_12_scaffold_148_16
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16304..17272
DNA (969bp) protein (323aa)
malate dehydrogenase, nad-dependent; K00024 malate dehydrogenase [EC:1.1.1.37]
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=573065 species="Bacteria; Pr
Malate dehydrogenase n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RNZ2_ASTEC
04302015_12_scaffold_148_17
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17273..18109
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000361559C
Uncharacterized protein {ECO:0000313|EMBL:ESY82478.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
04302015_12_scaffold_148_18
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18116..19024)
DNA (909bp) protein (303aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKH1_HIRBI
FKBP-type peptidylprolyl isomerase
04302015_12_scaffold_148_19
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19127..20014
DNA (888bp) protein (296aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
dTDP-4-dehydrorhamnose reductase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C435_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ45540.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54
04302015_12_scaffold_148_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

20063..20638
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000306FCA4
acetyltransferase, ribosomal protein N-acetylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
04302015_12_scaffold_148_21
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20628..20780)
DNA (153bp) protein (51aa)
Surface antigen {ECO:0000313|EMBL:GAM98430.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
surface antigen
04302015_12_scaffold_148_22
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21356..22360)
DNA (1005bp) protein (335aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B4CF50 rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ADC62889.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosu
04302015_12_scaffold_148_23
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22481..23299
DNA (819bp) protein (273aa)
3'(2'),5'-bisphosphate nucleotidase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
inositol monophosphatase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B67ACC
Putative inositol monophosphatase {ECO:0000313|EMBL:EAP90082.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanica
04302015_12_scaffold_148_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23354..23599
DNA (246bp) protein (82aa)
glutathione peroxidase (EC:1.11.1.9)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV49_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM27841.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononid
04302015_12_scaffold_148_25
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23737..25368)
DNA (1632bp) protein (544aa)
Glycoside hydrolase family 43 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNK9_BRESC
glycoside hydrolase family protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
04302015_12_scaffold_148_26
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25514..26602
DNA (1089bp) protein (363aa)
Transcriptional regulator, LacI family n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZBB8_9CAUL
Transcriptional regulator, LacI family {ECO:0000313|EMBL:GAD58327.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="
LacI family transcription regulator; K02529 LacI family transcriptional regulator
04302015_12_scaffold_148_27
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26716..27555
DNA (840bp) protein (280aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17); K01815 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
5-keto-4-deoxyuronate isomerase n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036DDDCF
04302015_12_scaffold_148_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27561..28319
DNA (759bp) protein (253aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CUT7_SPHYA
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:EKU74681.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
04302015_12_scaffold_148_29
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28316..29314
DNA (999bp) protein (333aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
PfkB domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QFF9_BRESC
PfkB domain protein {ECO:0000313|EMBL:ADL02474.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvib
04302015_12_scaffold_148_30
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

29815..30093
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X87_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85728.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
Displaying items 1-30 of 73 in total

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